Hibiscus syriacus (Rose-of-Sharon): 120180713
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Entry
120180713 CDS
T09559
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120180713
Enzymes [BR:
hsyr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
120180713
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
120180713
Prokaryotic type
Methylthiotransferases
120180713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
120180713
NCBI-ProteinID:
XP_039041931
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MTLPKSLALRLFMSRLLGSPITRCTVKNPSQSAMNTLITKGKSAKKLLVVAGCVPQGSRD
LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRKNKFVEILPINV
GCLGACTYCKTKHARGHLGSYTVDSLVERVKTVVADGVKEIWLSSEDTGAYGRDIGVNLP
ILLNAIVAELPPDGSTMLRIGMTNPPFILKHLKEIAAVLRHPCVYSFLHVPVQSGSDAVL
TAMNREYTVSEFRAVVDTLTELVPGMQIATDIICGFPGETDEDFAQTVKLIKEYKFPQVH
ISQFYPRPGTPAARMKKVPSTIVKNWSRELTSVFEAFTPYNGMEDRVERIWITEIATDGI
HLVGHTKGYVQVLIIAPESILGSSAMVKITSVGRWSVFGEVIETLTQVNVKMAPENVATQ
EKLPPCSDKYESCACSKESEPCSCGLDICGGQIRSEEYAVSKNDSLMENRGSKNPIHWLL
RKRKNHEHKKVENHIAMGLKNKQEWALGGWGIIDRALLVGIFVSLLMIVAAIMHLEFRTL
PSK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcccaaaatccctggcactcagactatttatgtcaagacttttgggttctccc
ataaccagatgcacagtgaaaaacccaagtcagtcagcaatgaacacgttaataacaaaa
ggtaaaagtgcaaaaaagctactggtggttgctgggtgtgttcctcaaggaagtcgagat
ttgaaagagcttgagggagtcagtatagttggagtccagcaaattgaccgtgttgttgaa
gttgtagaggagaccctgaaagggcatgaggtgcggcttttgaaccgcaagactttgcca
gcactggaccttcctaaggtcagaaagaacaagtttgttgagattcttccaattaatgtc
ggttgtttaggtgcttgcacttattgcaagacaaagcatgctcgtggtcacttagggagc
tacactgttgacagtcttgttgagcgtgtcaaaaccgttgtagctgatggtgtcaaggaa
atatggttgagtagtgaagatactggagcatatggtcgtgacattggggttaacctacca
attttgttgaatgccattgttgcggaacttcctcctgatgggagcactatgctacgaatt
gggatgactaatcctccttttatcttgaagcatctgaaagagatagcagctgttttgcgt
catccttgtgtatattcctttcttcatgttccagttcaatctggcagtgatgctgtcttg
actgccatgaatcgggaatatactgtgagcgagtttagggctgtggtagataccttgact
gaactcgtgccaggcatgcagattgcaactgatataatatgcggatttcctggtgaaact
gatgaagattttgctcaaacagtaaaacttattaaggaatacaagttcccacaagttcat
atatcgcagttctatcctagacctggaactcctgctgcaaggatgaaaaaggtcccaagc
actatagtgaagaattggagccgtgaattaacttctgtttttgaagcatttacgccgtac
aatggaatggaagacagagttgaaagaatttggattactgaaattgcaactgatggaatt
catttggttggccatacgaagggatatgtgcaggttctcataattgctcctgaaagtatt
ttgggttcttcagctatggtgaagataacatccgtgggaagatggtcagtgtttggggaa
gtgatcgagactctcactcaagtaaatgtgaaaatggctccagagaatgttgctactcaa
gagaaactgcctccttgctccgataagtatgagagttgcgcatgctctaaggagtcagaa
ccatgctcttgtggactagacatttgtggaggacagattagatcggaagaatatgcagtt
tccaagaatgatagtttgatggaaaatcgaggcagcaaaaatccaattcactggttacta
aggaagcgaaagaaccatgagcataaaaaggtggagaatcacattgccatggggctaaag
aacaagcaggaatgggccctggggggctggggcataattgatagagctcttcttgttgga
atctttgtcagcttgttaatgattgttgcagcaataatgcatctagaatttaggacttta
ccatcaaaatga
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