Hibiscus syriacus (Rose-of-Sharon): 120180935
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Entry
120180935 CDS
T09559
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120180935
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
120180935
Transfer RNA biogenesis [BR:
hsyr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
120180935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
120180935
NCBI-ProteinID:
XP_039042135
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All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MMAVRSVNGGLFCSVASPPLLTFSRRFRQFTSLPFRRNSELGLWFPVLCSGNQFLGYGGS
LSHSAHSLVDCVMEELTTWRSRRRIRASVKLTSSGELLEDKLVNPELEKGFLLEFKKDAD
RVLLGVAQRPDGKKNWMVYDQNGVTTSIKPQQITYIVPGVENFDQTEISKFLQKAHENLD
PTLLEIAWVELLEKNASVTAEELAEIIFGSSEPLESYCAHLLLSNDEVYFTVLATKGSRS
IYGPRATGQVEELLHKKLAKEAAEKELQDFVQLLVSAKAKPARSKPAKSSWMMDEKIRYK
IESLEAYAIDACNSDEQRKTAGMILKAMGLTKTSSSAVNVLINIGYFPAHVNLDLLKLNI
RTNHSDEVIAAAESILSESPDSDEMNREDLTHLKVYAIDVDEADELDDALSATKLQDGRM
KIWIHVADPTRFVEPGSIVDREALRRGTSVFLPTVTFPMFPENLAMEGMSLKQGEFCKAV
SVSVVLHFDGSIAEYSVQNSIIKPTYMLTYESATELLHLNLEEEAELKILSEAASLRLKW
RRQQGAIDTSTLETRIKVINPEYPNPLINLYVENQADPAMRLVSEMMILCGEVLATFGSC
NNIPLPYRGQPQSNIDVSAYSHLPEGPVRSSAVIKIMRAAETDFRKPIRHGVLGLPGYVQ
FTSPIRRYLDLLAHYQVKAFLRGESPPFSSGQLEGMASMVNMQVRAIRKISASSLRYWII
EYLKRQPKERKYRALILRFIKDRIASLFLIEVGFQGSAWVSIGCHVGDEVEVLVESASSR
EDFVLLEEVIRDESA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggttcgctccgtcaacggtggtttgttttgttctgtcgcatcacctcctcta
ttgacgttttcccgccgtttccgccaattcacctccttaccgtttcgccggaactccgag
ttagggctttggtttcctgttttgtgtagcggtaatcagtttttaggatatggaggcagt
ctttcgcattcggctcatagtctcgttgattgcgtcatggaagagctaacaacttggcgc
agtcgcagaagaattcgcgccagtgtcaaactaacgagtagcggtgagcttcttgaagat
aagcttgtcaatccagaattagaaaagggattcctgctggagtttaagaaggatgcggac
agggtattgctcggagttgctcagagacctgatggaaagaagaattggatggtgtacgat
cagaatggtgtcacaacatccatcaagcctcaacaaattacatatattgttccaggtgta
gaaaattttgatcagactgagatctcaaaatttctccaaaaagctcatgaaaacttggac
ccaacattactggagattgcttgggttgagcttcttgaaaagaatgcgtcagtgacagca
gaagaattagccgagatcatttttggcagttcagagcctcttgagagctactgtgctcat
cttttgctatcaaatgatgaagtatacttcactgtactggcaacaaaaggttctcgctcc
atttatgggcctcgagcgacaggacaagtggaagaacttttacacaagaagcttgccaag
gaggctgctgagaaagaacttcaggacttcgtgcaattacttgtgtctgcaaaagcaaag
cctgcacgttctaaacctgccaaatcttcctggatgatggatgagaaaatccgatacaaa
attgagtctctcgaagcatatgcgattgatgcttgcaacagtgatgagcaaaggaaaact
gctggaatgatcctgaaggcgatgggacttacaaaaacgtcatcctctgcagtaaacgtc
ctcataaatattggttattttcctgcgcatgtcaatcttgatctgttaaagttaaacatt
cgtacaaaccattctgatgaggttatagctgctgctgaaagtattttgtctgaatcacct
gactcagatgagatgaacagagaggatcttactcacttgaaggtttatgctattgatgtt
gatgaggctgatgagcttgatgatgccttaagtgcaacaaagttgcaagatggccgcatg
aaaatatggatacatgttgcggacccaactagatttgttgaacctgggagcatagtagac
agggaagcactgagaagaggaacctctgttttcttgccaactgtaacttttcctatgttt
cctgagaaccttgccatggaggggatgagtttgaaacaaggagaattttgcaaagctgtc
agtgtttctgttgtcttgcactttgatggcagcattgcagagtattcagttcaaaactca
atcattaaaccaacttacatgctgacctatgagagtgcaactgagctacttcatttgaac
ctagaagaggaggctgaactgaagattctatctgaagcagcttctctaaggttaaaatgg
cgtcgccagcagggtgcaattgatacatccaccctagaaactcgcatcaaagtaattaac
ccagagtatcctaatccattaattaacctttacgttgaaaaccaggctgaccctgcaatg
cggcttgtttctgagatgatgatactctgtggagaagttctagccacatttggatcttgc
aataacattcctttaccctatcgaggacagccacaatctaatattgatgtatctgcatat
tcacatcttcctgaagggccagttcgaagctctgccgttattaaaataatgcgtgcagct
gaaactgatttcaggaagcctattcgtcatggggttcttgggcttcctggttacgttcag
tttacatcgcccatccgcagatacttggatctccttgctcattatcaggtgaaggcattt
cttagaggtgaatctccaccattttcatctggtcagctagaagggatggcatcaatggta
aacatgcaggttagagcaataaggaagatctcggccagcagccttcggtattggataata
gagtatctgaaaaggcaaccgaaggagagaaaatatcgtgcattgatccttcgatttatt
aaagacaggattgcatccttgttccttattgaggtgggatttcaaggatctgcatgggtg
tctattggatgtcatgtaggagatgaagtagaagttctagttgaatctgcgagttctcgt
gaagattttgttctcctcgaggaggtaattagagatgaaagtgcttga
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