Hibiscus syriacus (Rose-of-Sharon): 120181210
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Entry
120181210 CDS
T09559
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120181210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120181210
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120181210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
120181210
NCBI-ProteinID:
XP_039042318
LinkDB
All DBs
Position
Unknown
AA seq
134 aa
AA seq
DB search
MMYRDTGRLNCSVSYTTFATPVRGQGSDHKEFSSMLHKALEGAIMLETFPKTTVDIFALV
LESGGSDLPVVISCASLALANAGIMMYDMLEWGVKALCIGWVDSRSERRRGSGGAERTAD
GVHSSEGAQKIKKR
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagagatactgggaggttaaattgtagtgtcagctatacaacatttgccact
ccagttcgagggcagggatcggatcacaaagagttttcatcaatgcttcataaagctttg
gaaggtgcaataatgttggaaacattccccaaaaccaccgtggatatttttgcattggtg
ttggagtctgggggcagtgatcttcctgtggtgatatcatgtgctagtcttgcccttgca
aatgcagggattatgatgtatgacatgttagaatggggggtgaaggcgctgtgcatcggc
tgggttgattctcggtctgagcggagacgtgggtcgggtggagcggagaggacggctgat
ggtgttcattcttctgaaggagcacagaaaataaagaaaagataa
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