Hibiscus syriacus (Rose-of-Sharon): 120181334
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Entry
120181334 CDS
T09559
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00900
Terpenoid backbone biosynthesis
hsyr01100
Metabolic pathways
hsyr01110
Biosynthesis of secondary metabolites
Module
hsyr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120181334
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hsyr01006
]
120181334
Enzymes [BR:
hsyr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
120181334
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
120181334
2.5.1.29 geranylgeranyl diphosphate synthase
120181334
Prenyltransferases [BR:
hsyr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120181334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
RTT107_BRCT_6
Motif
Other DBs
NCBI-GeneID:
120181334
NCBI-ProteinID:
XP_039042426
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MASVYLGSWVQSYSIFNQASRSKSFLFPSSFPFNPLMNLSSSTLKAHGFTSVPSVSAVFT
KGDTVKDEEQHPQNPSFDFKSYMIQKATTINQALDSAVPIRDPVKIYEAMRYSLLAGGKR
VRPVLCLAACELVGGQESKALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFG
EDIAVLAGDALLAYAFENVAVSTVGVSHGRIVRAVGELAKSIGAEGLVAGQVVDICSEGL
TDVGLDRLEFIHVHKTAALLEAAVVLGAILGGGCDEDVEKLRKFARYIGLLFQVVDDILD
VTKSSKELGKTAGKDLVADKLTYPKLIGIEKSREFAEKLRSDSLELLQGFDPEKAAPLVA
LANYIAYRQN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggtgtatcttggttcttgggttcaatcttactcgattttcaaccaagcttct
agatccaaatcttttctttttcccagttcgtttccgttcaatccccttatgaatctgtcg
tcttcgaccttgaaagctcacggctttacatctgttccttcggtttcagcggtttttacc
aaaggagacaccgtgaaggacgaagagcagcaccctcagaacccgagttttgatttcaaa
tcctacatgattcaaaaggcaacgacgattaaccaggccctggactcggctgttccaatc
cgtgacccggttaaaatctatgaagcaatgcgttactcgcttttagcgggcggcaaaagg
gtccgtccggtgctctgtttagctgcttgtgagcttgttggcggccaagaatccaaggct
ttgccggctgcttgtgctgttgaaatgatccacaccatgtctctaatccacgatgatctt
ccttgcatggacaacgacgatcttcgtagaggaaaaccgactaatcacaaggtattcggt
gaggatatcgctgtcttagctggggatgctcttttagcttatgctttcgaaaatgtagcc
gtttctacagttggtgtttcacatggtaggatagtgagagcagttggagaattagctaaa
tccattggggctgaagggttggtggctggtcaagttgtggatatatgtagtgagggacta
acagatgtggggttggatcgtttagaattcattcatgttcacaaaactgctgctttgctt
gaagctgctgtggttttgggggcaattctcggaggcggatgcgatgaagatgtcgaaaag
ttgaggaaattcgctcggtatatcggtcttttgtttcaggttgtggatgatattcttgat
gttacaaagtcatccaaggaattagggaagactgcaggcaaagatttggtggctgataaa
ctgacttatcctaagttgatcggaatcgagaagtcgagggagtttgcagagaagttgagg
agtgattcgttggagttgcttcaaggatttgatcctgagaaagctgctcctttggttgcc
ttggccaattacatagcttacaggcaaaactaa
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