Hibiscus syriacus (Rose-of-Sharon): 120181601
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Entry
120181601 CDS
T09559
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120181601
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120181601
Surveillance factors
Other surveillance factors
120181601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
120181601
NCBI-ProteinID:
XP_039042622
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MDDGKLDLPDDLLSSKIGSEHSPKDQLTSESSIPLSPQWLYSKVADAKMLPAGTTGDIKS
PILLPRGASGDPNLKDSWRLDGSQDKKEWRRAVPDLEKRHWREEERETGLLGRRDRRKED
RRPDISGAQDISSRGSGIESRRENKWSSRWGLEEKEKDSQNDKRTDSKMEDAPTEKQALA
IGGRLASEREIDSRDKWRPRHRLEVHAGGSTSFRSAPGFSLGRGRVEKSNVGFTVGRGKP
LSVSVIGARVGDKNKTINAYCYPRGKLLDIYRMQKTSLNFDVLPDETDHSSTITHKEIVE
PLAFVPPDAEEEAVLGDIWNVKTTNSDEICNSFRDTSEEKQCFSVNSEDGVQSGEKASVN
KNYQEMYSSKEGGQRYVYVTPSDIDETNALGSDREIDGSANYMDGLKSFDNQAVADRKME
KDSNMKDKESSWQFGVGSDLPDGSSSLFGFQSLQPTLGYNQINLEGNNESHSLESITPPE
ELSLCYLDPQGVVQGPYLGIDIISWFEQGYFGTDLPVRLANAPDGLPFQGLGELMPHLRM
NSGSASGVGAVTRMQIPDQFEGSLEETISSASAPELKGSAIGREHQQFLSAFETSGTNFQ
LRVPSQSYHSEHQFSEDQKLHKFADAGADEIIFPRRPGSAGAEPFKVSGEIQDPFSSNPA
SHLPISNEFSKTIVPSHRGDELLPDARSDDYRRNSVFNPNIHLGSPLSHREQEHNGLDLV
QHLMSQKLPSESQSTGFGSEQIYSLQSKNLNHQQSIHLSAPHMEHLLELQFEQQRQLELQ
REQQHHNHQIHLLQQLQQQHLHQQPSQVRELLLNQLLKHQVSDPVYGQHTFDVARDNLLD
QIQLKKHLLDGLQQNSHASMHLDLSPEQIIQAKINQSAVLGQQADILDFMLQAKYGNMIP
SEHQLRLQRDQFQAEQLSRALNQQLSMEGDRQHAGSWSVDEVGQFVRNPGIHPQAQTAGL
NGSDPHQKRFSSSEEQFSNLQMNRALQEQQQRGAFDPSATEFARSLSAAAPGMKVDNVNT
LDLSEHFYMHYNNQLGPFSSGNHSLDRQVSGDVYTSHPDLIESYQSRQNGQLENSWAENQ
MQQLSLEADLQRRESEVDSNTWTPTGGIHENSKKALMDLLHQKLGIQYGQSSEVDYQYST
SSSNPPFNHFKDQEVHENVSLSEGPQNSVSFTEEQSFLLDSEDPFSSSYADARLMAKSTV
DKELVELEGKEKISGLKGMISRSGSVSGSEDLEQVETSLNYDDLQGQTHVRHGSFSDKTS
HVSSTQNVFSEQNTVLMKQKSLATSEGRQEGMLMYAGAKRNTKTRASGNDAGMRMTSSSN
DAAVSEASSFIDILKQPAHLHGIKAAVYGSAFEPSSDAPASQVPRSSKKKGKKGKQIDPA
LLGFKVTSNRILMGEIQRPNE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggaaaactcgatctgcccgatgatctcttatcttccaaaatcggctctgaa
cactcccccaaagatcaactgacttcggagagcagcatacctttgtcccctcaatggctt
tactctaaagtagctgatgctaagatgttacctgctggaacgactggggatataaaatcg
ccaattttgttgcctcgtggagcctctggtgatcccaatctgaaagatagttggcgttta
gatggttctcaggacaagaaagaatggaggagggccgtgcctgatctagaaaagcgtcac
tggcgtgaagaggagagagaaacaggcttacttggccggagagatcgcagaaaagaagac
cggcgccctgatatttctggtgcgcaagatattagtagtcgtggttcagggattgaatct
cgaagagaaaataagtggtcttcaagatggggtcttgaagaaaaagagaaggattctcaa
aatgataagaggacagattctaagatggaagatgcccctactgagaaacaagcacttgcc
attggggggcgcttagcttctgaacgcgagattgattctcgtgataaatggagaccacgt
catcgtttggaagttcatgcaggcgggtccacttctttccgcagtgctccaggattcagc
ttggggaggggacgagtggagaaatcaaatgtgggttttacagtaggacgagggaagcct
ctttctgtttctgttattggtgctcgtgtcggggataaaaacaagaccatcaatgcatat
tgctacccaagaggaaaactccttgacatttaccgcatgcaaaagacttctctgaatttt
gacgttctacctgatgagactgatcattcatcaacaataacacacaaagaaatcgttgag
cctttggcatttgttcctcctgatgccgaggaagaggctgtccttggagatatatggaat
gtaaaaactacaaacagtgacgagatctgcaactcatttagggacacaagtgaagaaaaa
caatgtttctcggttaacagtgaggatggtgttcaatctggtgagaaggcttctgtaaac
aaaaattatcaagaaatgtatagttcaaaagaaggtggacaaagatatgtatatgtgaca
ccatctgatattgatgaaaccaatgctttggggtcagatagggagattgatggttctgca
aattacatggatggattaaaatcttttgataatcaagcagtagctgataggaaaatggaa
aaggactccaacatgaaggacaaagaatcatcctggcaatttggagtgggtagtgatctt
cctgatggctcaagctctctatttggttttcagtcactgcagcctactcttggttataac
cagataaatcttgagggaaataatgagtcacattcactggaaagtattacccctccagag
gaattgagcttgtgctatcttgatcctcaaggggtagttcagggaccatatctgggaatt
gacataatttcatggtttgagcaaggttattttggtacagacttacctgttcgattggca
aatgctcctgatggattgcctttccaaggacttggtgaattgatgcctcacttaaggatg
aattctggttcagcctccggtgttggtgcagttacaagaatgcaaatacctgatcagttt
gaagggagcttggaagagaccatatcttccgcttctgctccagagttgaaggggtctgcc
attggacgtgagcatcagcagtttttgtctgcttttgagacttctggtactaattttcag
ttaagagtgccttctcaaagttatcattccgagcatcagttttctgaagatcaaaagctc
cacaaatttgctgatgctggtgcagatgaaattatttttcccagaaggcctggaagtgct
ggtgcggagccttttaaagtttctggtgaaattcaagatccttttagtagcaatcctgca
agccatctgcctatttcaaatgaattttcaaaaaccattgtgccttctcatcgtggtgac
gagttacttccagatgctcggtctgatgattacagaagaaattctgtgtttaatcctaac
attcatctaggcagccccttatctcacagggaacaagaacacaatggtttggacctggta
cagcacttaatgtcacaaaagttgcccagtgaatcacaatcaactggatttggttccgag
caaatttatagtttgcaaagcaagaatctcaatcatcagcagtcaatccatctttcagct
ccgcatatggaacatcttttggaacttcagtttgaacagcagcggcagttggaacttcag
cgagagcagcagcatcataaccatcaaattcatttgttgcagcaattgcaacagcaacat
ctacatcagcagccatctcaagttcgggagttgctacttaatcaattgctgaagcatcaa
gtttctgatcctgtttatggccagcacacatttgatgttgctagagacaacttgcttgat
cagattcagttaaaaaagcatcttctggatggattgcagcagaattctcatgcttcaatg
cacttggatctatcaccggagcagattatccaagcaaagataaaccagagtgcagttcta
gggcagcaggctgatattttggatttcatgttacaagcgaagtatggcaatatgattcct
tcagagcatcagcttcgtcttcaacgtgatcagtttcaagctgagcaattatctagggca
ctgaaccaacaattaagtatggagggggatagacaacatgctggttcttggtctgtagat
gaagttggtcagtttgtcaggaatcctggcattcatccccaggctcaaacagcggggctg
aatggttcagatcctcaccaaaagaggttttcatcttctgaagagcaattcagcaatctt
caaatgaatcgtgctttgcaggagcaacagcagcgaggggcttttgaccccagtgctaca
gaatttgccaggtctctttctgcagctgctcctgggatgaaagtagacaatgtaaatact
ctagatctatctgagcatttctatatgcactataacaaccaactaggtccattttcttct
ggtaatcactctcttgaccggcaagtttcgggtgatgtgtacacttctcatccagattta
atagagagctaccagtctaggcaaaatgggcagctagaaaatagttgggcggaaaatcaa
atgcaacaattaagtcttgaagcagatctgcaaagaagggagtctgaagttgattcaaac
acttggacaccaactggagggattcatgaaaactctaagaaagctttaatggaccttctt
caccaaaaacttggtattcaatatggacagtcatcagaagtagattatcaatattctaca
tcgtcttcgaatccaccttttaatcatttcaaagatcaggaagttcatgagaacgtttct
ttatcagaaggccctcaaaattctgtctcatttacagaagaacagtcgtttttgttggac
tctgaggatcccttttctagtagttatgcagatgctaggctgatggcaaaatccacagtg
gacaaagaattagttgaactggagggcaaggagaagataagtggattgaaaggcatgatt
tctaggagcggttctgtgtcagggtctgaggacttagagcaagtagagacatctttgaac
tacgatgatctacaaggtcaaacccatgtccgacatggttcttttagtgataaaacttca
cacgtttcttcaacccagaatgttttttccgaacaaaacacagtgcttatgaagcagaaa
agccttgcaacttctgaaggaagacaggaaggcatgttgatgtatgcaggtgcaaagagg
aacacaaaaactcgggcatcgggcaacgatgcaggtatgagaatgacctcatcttccaat
gatgctgcagtgtctgaggcatcatcattcatagatattctcaagcagccggctcatctt
cacggaatcaaagcagcagtgtacggctctgcttttgagccatcatctgatgcgcctgcc
tcacaagttccccgatctagcaagaaaaaagggaagaagggaaaacagatcgatccggcc
ttgctcggtttcaaggttacaagcaaccgcatattgatgggtgagatccaacgccctaac
gagtaa
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