Hibiscus syriacus (Rose-of-Sharon): 120181854
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Entry
120181854 CDS
T09559
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120181854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120181854
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120181854
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120181854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
120181854
NCBI-ProteinID:
XP_039042831
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MFCSEIRVWYCLSLLFVLLEMSDLPKVDSVHIREVWNDNLEEEFALIREIVDKYNYVAMD
TEFPGVVLRPVGTFKNINDFNYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGTENPCIWQ
FNFREFNLSKDIFASDSIELLRQCGIDFKKNNERGIDVKRFGELLMSSGVVLNDSVSWVT
FHSGYDFGYLLKLLTCKSLPDSQAGFFDLINIYFPVVYDIKHMMKFCNSLHGGLNKLAEL
LEVERVGVCHQAGSDSLLTSCTFRKLRENFFNGSTEKYAGVLYGLGVQNGQTN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttcagagatcagggtttggtattgtttatcgcttttatttgttcttctggaa
atgtcggatttgcccaaagttgattcggttcatattcgggaagtttggaacgataatcta
gaagaagagtttgctttaatccgtgaaatcgttgataaatacaattatgtggctatggat
accgagttcccgggtgtggttctacgccccgtgggaactttcaagaatataaatgatttt
aactaccaaactttgaaagataacgtggatatgctgaaattgatccagctgggtctcacc
ttttctgatgagcacgggaatcttcccacttgtggaactgaaaacccttgcatttggcaa
ttcaatttccgtgagtttaatttgagcaaagatatcttcgccagcgattccattgagttg
ttgcgtcagtgtgggattgatttcaagaagaataacgagaggggcattgatgtgaagcgg
tttggtgagcttttgatgtcgtctggggtcgtgttgaatgatagtgtgagttgggtcacc
tttcatagtggatatgacttcgggtatttgcttaagcttttgacctgcaagagtttgcct
gatagtcaagccgggttctttgatctgattaatatatattttcctgtggtatatgatata
aagcatatgatgaagttttgcaacagccttcacggtggattgaacaagcttgccgagttg
ttggaagtggaaagagttggtgtgtgccatcaagccggctcggatagcttgctcacatcg
tgtacgtttaggaagctgagagagaactttttcaacggctccacagagaaatatgcaggt
gtgttgtatggcctaggtgtccagaatggacagactaattag
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