Hibiscus syriacus (Rose-of-Sharon): 120183308
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Entry
120183308 CDS
T09559
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120183308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120183308
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120183308
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
U-box type E3
120183308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
zf-RING_UBOX
zf-C3HC4_4
MLKL_N
zf-Nse
Arm_2
HEAT_EZ
MCAfunc
zf-C3HC4_2
KAP
Adaptin_N
zf-NOSIP
zf-C3HC4
HEAT_EF3_GNC1
Motif
Other DBs
NCBI-GeneID:
120183308
NCBI-ProteinID:
XP_039043962
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEEEKGELGQSLIDAVNQIAPIGDYRCAVRKEFCNLARRLKLLSPMFEEIRESKEQIPEE
TVKALVSLKEALISAKELLRFGSEGSKIYMVLERDQIMHKFHEVTARVEQALSGIPYENL
DISDEVKEQVELVLAQFRRVKGRVDAADVELYEDLLSLFNKSSDGAADSDVLRRLAEKLQ
LVGIAELTQESIALHEMVSASCGDPGETFEKMSNLLKKIKDFVQTENPNLAASVREKNLP
PSSSGQATTDGNQKTPAIPDDFRCPISLELMKDPVIVSTGQTYERSCIVKWLEQGHGTCP
KTQQTLSSRTLTPNYVLRSLIAQWCEANGIEPPKRPSSSRPNKTTSACSPAEHAKFEILL
RKLASFSPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVTLLSTPDSRTQEHAVTAL
LNLSICEDNKGSIMSFGAVPGIVQVLKKGSMEARENAAAALFSLSVVDENKVTIGASGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEAL
AILAILSSHPEGKSAIGAAEAMPVLVDVIGNGSPRNRENAAAVLVHLCSGEQQHLAAAQE
LGVMGPLLDLAQNGTDRGKRKAAQLLERMSRFIEQQKQVQVQVQTETHAHQSQSETQQPQ
PPSMAYAVDR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagagcttgggcagagcttgatcgatgcggtgaaccaaatagct
cccatcggcgattacagatgtgccgttaggaaggagttttgcaatctcgctaggagacta
aagctgttgtcgccaatgttcgaggagattagagagagcaaagagcaaatccctgaagaa
actgttaaagctttggtctcgctgaaagaagctttgatttcggcgaaggagttgcttaga
ttcggcagtgaaggcagcaagatttacatggttttagagagagatcagattatgcataag
tttcatgaagtgacagctcgggtggagcaagctttgagcggaattccctatgagaatctt
gacatatcagatgaagttaaggaacaggtggagcttgttctagctcagttcaggagagtt
aaaggaagggttgatgctgcagatgttgaactatatgaggatctattatcactcttcaat
aagagtagtgatggggctgcagattcagatgtactaaggagattggccgagaagttacaa
ttggtggggatagctgaacttacgcaagaatcgattgctctacatgagatggtttctgca
agttgtggagatcctggggaaacctttgagaagatgtcaaacttattaaagaaaatcaag
gattttgtgcagactgaaaatcctaatttggctgcttctgtgagggaaaagaatcttcct
cctagtagtagtggtcaagcgaccactgatggaaatcagaagactccagctataccagat
gatttccgctgtccaatatccttggaattgatgaaggatcctgtcattgtttcaacaggg
cagacttatgaacgttcttgtattgtgaaatggctggagcaaggtcatggaacttgtcca
aagacacaacagaccctcagtagccggacccttacacccaattatgtactgcgtagtcta
atagctcaatggtgtgaggcaaatggcattgaaccacccaaaagacccagtagttctaga
cccaataaaaccacatctgcctgctcacctgcagagcatgccaagtttgaaattctcctt
cgtaagcttgcatccttcagtcctgaagaccaaagaatggctgcaggtgaaatccgtctt
cttgccaaacgaaatgcagataatcgtgtggccatcgctgaagctggggccatacctctc
cttgtgacactcctttcaacacctgattcacggacccaagaacatgctgtaacagcactt
cttaacctttccatctgtgaagataacaaaggaagtatcatgtcctttggagcagttccc
ggtatagttcaggtacttaagaaggggagcatggaagctagagagaatgcagcagctgct
ctcttcagcctttctgtagtggatgaaaataaggtaacaattggtgcctcgggagcaatc
cctccgctagtgacactgctaagcgaaggcacacaaaggggcaaaaaggatgcagcaaca
gcactcttcaatttgtgcatataccaagggaacaaggggaaagcagtgagagctggagtt
gtgccaacattaatgcgtttgttgacagaacctggaggtggaatggtggacgaggcattg
gccatacttgcaatactctctagccatccggagggtaagtctgccataggagcagcagag
gcaatgccagttttggtagatgttattggtaatggatcaccaaggaatagagagaatgca
gctgcagtgttggttcacctctgttccggagaacaacaacatttagcagcggcccaggaa
ctcggagtgatgggccctttgttggacttggcacaaaatggtacagataggggcaagcgg
aaggctgctcaattgcttgaacgcatgagcaggttcattgagcagcaaaagcaggtgcag
gtgcaggtgcagactgagacccatgctcatcagtcccagtctgagactcaacaaccacag
ccaccctccatggcatatgccgttgatagatga
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