Hibiscus syriacus (Rose-of-Sharon): 120183597
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Entry
120183597 CDS
T09559
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120183597
Transcription machinery [BR:
hsyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
120183597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
120183597
NCBI-ProteinID:
XP_039044205
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MCFRMNLKGVFPVPSHFLANSPSKLPSSSVRGKEASFNSARLSSPSVTSDEGVILSKGPP
KACASSVALQTIENGCLEVEEKIKIDKGSRSQSCSHVMIGESNEPIGGNKSSLCTGLQIC
NTSHYGVLMENLNVLEEMLVDSDMLRLEREILLQLGRLGALNLFNNYLSRTHRPLNMFDL
SDVASVCGVCDMNGLVDSEKDKRIVCSIKKKQKKKRREKAAENNTISTQSLPSNTLRGHF
QKPKVSSPKRMSDTRKRLSTIARNEVEISKGVKVVANLERIKTTMEEETGRAVSLSCWAE
AAKLTAKVLQHNLHYGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSIGVLQGA
ERFDYTRGYKFATYIQYWIRKSISRMVARHARGIQVPCTLSRAIGQIQKARKALSQSHGK
YPEEDEIAKMTGLSLSKIRSADKCFRVVGSIDQKIGDCINAKYLEFIPDMSIRNPEKTVM
RQHMKEDLHDLLNGLEKRERQVMVLRYGLKGSPPKSLEEIGRLFHVSKEWIRRIEMKAMT
KLKDKETCRNLSHYLDL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcaggatgaatctcaaaggtgttttcccggttccctctcatttccttgccaat
tcaccttctaagctcccttcttcttccgtaagagggaaggaggcttcttttaactcagct
agactgtcttctccctctgtaacatctgatgaaggtgtgattttatcgaaaggtcctcca
aaagcatgcgcttcatccgtagctctgcaaacaatagaaaatggttgcttggaagttgaa
gagaagataaagattgacaagggatcacggtcacagagttgttcgcatgttatgatcggt
gaatctaatgaaccaatcggagggaacaaatcttccttgtgcacgggcctgcaaatatgc
aatacatcacattatggtgtgctaatggaaaatctcaacgttttagaggagatgcttgtt
gattcagatatgttgagattggagagggaaattctacttcaactaggaaggcttggagct
ctaaatttatttaataactatttgtctaggactcatagacctctgaacatgttcgaccta
tctgatgttgcttctgtttgtggagtgtgtgatatgaacggcttggtggacagtgaaaag
gataaaagaattgtttgttctataaaaaagaaacaaaaaaagaagagaagagaaaaagca
gcagaaaacaatacaatttccacacaatcactgccttccaacaccctacgcggacacttt
cagaagcccaaagtttcttctccgaaaagaatgtcagacactaggaagagattatcgaca
attgctagaaatgaagtagaaatatcaaagggagttaaggtggttgcaaacttggagagg
attaaaacaactatggaagaggaaactgggagagctgtgagcttgagttgctgggcagaa
gcagccaaacttactgcgaaggtactgcaacataatttgcattatggttggtactgcagg
gatgagctactaaggagtacacgctccttagtcctctactttgcaaggaactataggggt
ctgggaatagcccatgaagatttaatccaggcaggaagtataggagtcctacaaggtgca
gaaaggtttgactacacaaggggatacaaatttgctacctatatacagtactggataagg
aaatcaatttcgagaatggtggcacggcatgctagagggatccaagttccttgcacatta
agcagggcaataggacagatacaaaaagctcggaaagcccttagccaaagccatgggaaa
tacccagaagaggatgaaatagccaagatgacaggtctttctttgtcaaaaatcaggtcg
gctgataaatgcttcagagttgttggttcaattgaccagaaaatcggagattgtatcaat
gcaaaatatttggaatttatcccagacatgtcaatacggaacccggaaaaaactgtgatg
aggcagcacatgaaggaagatcttcatgatcttttgaatggtttggaaaaaagagagagg
caagtgatggttctacgttacgggctcaagggctctcccccaaagtcactcgaggagatc
ggaaggctttttcatgtgagcaaagagtggataagaaggatagagatgaaagcaatgaca
aagttgaaggataaagaaacctgcagaaatttaagccattatttggatttatag
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