Hibiscus syriacus (Rose-of-Sharon): 120183741
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Entry
120183741 CDS
T09559
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120183741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120183741
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120183741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
GTP_EFTU_D4
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
120183741
NCBI-ProteinID:
XP_039044310
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MPRKVNYGVDYDDDYDEYDYGYEVEDNEETPPEQETIKRSVWRCAVCTYDNDETMSSCDI
CGVLRGPLLKNLTYDEKRAGFNSLAANIFYLKSSRVHSIVVGEDEAVKVSSKRLDSSDVS
TAKDKHNRLDEITFNMQSSGKSLLSLMPKERNVMVANSSSSRNGGKAHDLASNLKNISFS
AESGHSNDTNPGRANSYAQYKPEKWMLPGKTEHSLAQLNLAIVGHVDSGKSTLSGRLLHL
LGRISQKDMQKYEKESKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSKIYHVVVL
DSPGHKDFVPNMITGATQADAAILVIDASIGSFEAGMDGTKGQTREHAQLIRSFGVDQLI
VAVNKMDVVDYSKDRFDLIILQLGTFLRSCGFKDSSVSWIPLSAAKNQNLVSAPSDFRLS
WYHGPNLLDTIDSFQPPPRDFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSGSKVLV
MPSAIIATVRSLERDSQPCTIGRAGDNVAVSLHGVDANHVLAGGVLCHPDFPVAFAKHLE
LKVLVLDVATPILIGSQLEFHIHHAKESARVARISSLLDSKTGKVAKKAPRCIVAKQSAV
VEVTLHEAVCVEEFSKCKALGRVFLRTLGRTVAVGIVTRIVEV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaaaagttaactatggagttgattatgatgatgactacgatgaatatgactat
ggatatgaagtagaagacaatgaggaaacgcctcccgaacaagaaacaatcaaacgcagt
gtgtggcgttgcgctgtatgtacctatgataatgatgaaaccatgtcatcatgtgatatt
tgtggagttcttcgtggtcctttgctcaaaaacttaacctatgatgagaagagagcaggc
tttaattcacttgcagccaacattttttacttaaaatcttccagagttcactcaattgtg
gttggggaggatgaggcagttaaagtaagttctaaaaggttagatagttcagatgtgtca
acagcaaaagacaagcacaatagactggatgagattacttttaatatgcaatctagtggg
aaaagcttactatcattgatgccaaaagaaagaaatgttatggtggctaatagcagctct
tcaaggaatggaggtaaggcacatgatcttgccagtaatctgaagaacatttctttttct
gctgaatctgggcactccaatgatacaaaccctggaagagcaaattcatatgcacagtat
aaacctgaaaagtggatgcttccaggaaaaacagaacattcactggctcaactaaatctc
gcaattgttgggcatgttgattctggaaaatcaaccctctctggtagattgcttcacctt
ttgggacgaatatcccaaaaagatatgcaaaaatatgaaaaagaatccaaattgcaggga
aaaggatcctttgcttatgcttgggcattagatgagagtgctgaagaaagggaaagggga
attactatgacagtggctgtagcttattttgattcaaaaatatatcatgtcgttgtcctt
gactccccaggacacaaagattttgttccaaacatgataactggggcaacacaagctgat
gctgcaattcttgtaatagatgcttctattgggtcatttgaagctggtatggatggcaca
aagggacagactagggagcatgcacaactcatccgaagttttggcgttgatcagcttata
gttgctgtaaacaaaatggatgttgtagactattctaaggatcggtttgatttgataata
ttgcagcttgggacatttctccgctcttgtggttttaaggattcctctgtctcatggatt
ccactgagcgctgccaaaaatcagaatttggtgtctgcaccttcggatttccgtctgtcc
tggtatcatggacccaatctattagatacgattgattccttccaacctcctcctagagat
ttttcgaagcctctacttatgcctatatgtgatgttataaaatcatcttcacaggggcag
gtgtctgcatgtggcaagttggaggctggagctttaagaagtggatcaaaggttttagtt
atgccatcagcaattatagcaactgtgcgttccttggagcgtgattcccagccttgtacg
attggaagagctggggataatgttgctgtcagcctgcatggagtagatgcaaatcatgtg
ttggctggtggtgttttatgccatcctgattttccagttgcatttgctaaacatttggag
ttgaaggtgcttgttttggatgtcgcaaccccaattttaatcggttctcagttggagttt
catatacaccatgcaaaggagtctgctagagttgcaaggatatcgtctttacttgattca
aagaccgggaaagttgcaaagaaagcaccccgctgcattgttgctaagcagagtgcagtt
gttgaggtgactttgcatgaagcggtttgtgtggaagagttttcgaaatgcaaagccctt
ggaagggtgtttcttaggacattgggaagaacagttgctgtgggcatagtgacccgaata
gttgaggtgtag
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