KEGG   Hibiscus syriacus (Rose-of-Sharon): 120183741
Entry
120183741         CDS       T09559                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120183741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120183741
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120183741
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 Zn_ribbon_RanBP GTP_EFTU_D4 RUBY_RBDX
Other DBs
NCBI-GeneID: 120183741
NCBI-ProteinID: XP_039044310
LinkDB
Position
Unknown
AA seq 643 aa
MPRKVNYGVDYDDDYDEYDYGYEVEDNEETPPEQETIKRSVWRCAVCTYDNDETMSSCDI
CGVLRGPLLKNLTYDEKRAGFNSLAANIFYLKSSRVHSIVVGEDEAVKVSSKRLDSSDVS
TAKDKHNRLDEITFNMQSSGKSLLSLMPKERNVMVANSSSSRNGGKAHDLASNLKNISFS
AESGHSNDTNPGRANSYAQYKPEKWMLPGKTEHSLAQLNLAIVGHVDSGKSTLSGRLLHL
LGRISQKDMQKYEKESKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSKIYHVVVL
DSPGHKDFVPNMITGATQADAAILVIDASIGSFEAGMDGTKGQTREHAQLIRSFGVDQLI
VAVNKMDVVDYSKDRFDLIILQLGTFLRSCGFKDSSVSWIPLSAAKNQNLVSAPSDFRLS
WYHGPNLLDTIDSFQPPPRDFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSGSKVLV
MPSAIIATVRSLERDSQPCTIGRAGDNVAVSLHGVDANHVLAGGVLCHPDFPVAFAKHLE
LKVLVLDVATPILIGSQLEFHIHHAKESARVARISSLLDSKTGKVAKKAPRCIVAKQSAV
VEVTLHEAVCVEEFSKCKALGRVFLRTLGRTVAVGIVTRIVEV
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgcctcgaaaagttaactatggagttgattatgatgatgactacgatgaatatgactat
ggatatgaagtagaagacaatgaggaaacgcctcccgaacaagaaacaatcaaacgcagt
gtgtggcgttgcgctgtatgtacctatgataatgatgaaaccatgtcatcatgtgatatt
tgtggagttcttcgtggtcctttgctcaaaaacttaacctatgatgagaagagagcaggc
tttaattcacttgcagccaacattttttacttaaaatcttccagagttcactcaattgtg
gttggggaggatgaggcagttaaagtaagttctaaaaggttagatagttcagatgtgtca
acagcaaaagacaagcacaatagactggatgagattacttttaatatgcaatctagtggg
aaaagcttactatcattgatgccaaaagaaagaaatgttatggtggctaatagcagctct
tcaaggaatggaggtaaggcacatgatcttgccagtaatctgaagaacatttctttttct
gctgaatctgggcactccaatgatacaaaccctggaagagcaaattcatatgcacagtat
aaacctgaaaagtggatgcttccaggaaaaacagaacattcactggctcaactaaatctc
gcaattgttgggcatgttgattctggaaaatcaaccctctctggtagattgcttcacctt
ttgggacgaatatcccaaaaagatatgcaaaaatatgaaaaagaatccaaattgcaggga
aaaggatcctttgcttatgcttgggcattagatgagagtgctgaagaaagggaaagggga
attactatgacagtggctgtagcttattttgattcaaaaatatatcatgtcgttgtcctt
gactccccaggacacaaagattttgttccaaacatgataactggggcaacacaagctgat
gctgcaattcttgtaatagatgcttctattgggtcatttgaagctggtatggatggcaca
aagggacagactagggagcatgcacaactcatccgaagttttggcgttgatcagcttata
gttgctgtaaacaaaatggatgttgtagactattctaaggatcggtttgatttgataata
ttgcagcttgggacatttctccgctcttgtggttttaaggattcctctgtctcatggatt
ccactgagcgctgccaaaaatcagaatttggtgtctgcaccttcggatttccgtctgtcc
tggtatcatggacccaatctattagatacgattgattccttccaacctcctcctagagat
ttttcgaagcctctacttatgcctatatgtgatgttataaaatcatcttcacaggggcag
gtgtctgcatgtggcaagttggaggctggagctttaagaagtggatcaaaggttttagtt
atgccatcagcaattatagcaactgtgcgttccttggagcgtgattcccagccttgtacg
attggaagagctggggataatgttgctgtcagcctgcatggagtagatgcaaatcatgtg
ttggctggtggtgttttatgccatcctgattttccagttgcatttgctaaacatttggag
ttgaaggtgcttgttttggatgtcgcaaccccaattttaatcggttctcagttggagttt
catatacaccatgcaaaggagtctgctagagttgcaaggatatcgtctttacttgattca
aagaccgggaaagttgcaaagaaagcaccccgctgcattgttgctaagcagagtgcagtt
gttgaggtgactttgcatgaagcggtttgtgtggaagagttttcgaaatgcaaagccctt
ggaagggtgtttcttaggacattgggaagaacagttgctgtgggcatagtgacccgaata
gttgaggtgtag

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