Hibiscus syriacus (Rose-of-Sharon): 120184138
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Entry
120184138 CDS
T09559
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120184138
Transcription machinery [BR:
hsyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
120184138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
DUF7399
DUF6697
HTH_5
DprA_WH
Motif
Other DBs
NCBI-GeneID:
120184138
NCBI-ProteinID:
XP_039044620
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MGVVSVSSSATRTPLGLSTKFCTQRCTLRRPCIVAFKADKSDNTTLVTPQELNLSPVETT
KGHPKQRGKAKKASKTANRVLADEGSPCIMDVDYNEAAAKLENIYKLSPSTQTFDEEGEK
SETKGRHPRRKKSKESDGKVDDANDKIVIRNRTKKTRRLNLDKRVELKRNREEKPVFSAQ
RKKGIVNVSEKIDRLVRDYSASTNLVSLDWKKMKIPPVLLSTENTWLFKLMQPMKTLLEA
KENLQKELGRDPTDDELAEATNMSTAQVSRHLEVGRAARNKLIKHNLRLVLFVINKYFQD
FANGPRFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRNAIIRSMTISNFTRVPFG
LESVRVEIHRARLELLLELQREPTDDEVIEKVGISPERYQEVMRASKSVGSLHSRHSVTQ
EEFISGITDVDAVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
GGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttagtgtttctagttcagctacccgaactccactaggactaagcacaaag
ttctgtactcaaagatgtacattgagaagaccttgtattgtagcatttaaagcagataaa
tccgataatacaactctagttacgcctcaagagcttaatctttcgccggtggaaaccact
aaggggcacccgaagcaacgtgggaaagctaaaaaggcttcaaaaacagcaaaccgtgtc
ttggctgatgaaggttctccatgcattatggacgtagattacaacgaagctgctgcaaaa
cttgaaaacatttataagcttagcccttcaactcaaacatttgacgaagaaggggaaaaa
agtgagacaaaaggacgccatccaaggagaaagaagtctaaagaaagtgatgggaaagta
gatgatgctaatgataagattgtcattaggaacaggactaagaagactagaagattgaat
cttgataaaagggttgaactgaaaaggaacagagaagaaaagccagtattttctgctcag
aggaaaaagggtattgtgaatgtaagcgagaagatcgataggcttgtccgggactattcg
gcttcaaccaatttggtcagcctggactggaaaaagatgaagatacctccggttttactg
tctactgaaaatacttggttgtttaagctaatgcagccaatgaagacattgctcgaggcg
aaagagaacttgcaaaaggaattgggtagagatcctactgatgatgaattagccgaggcc
acaaatatgagtacagctcaagtgagtagacatttagaagtcggtcgagctgctagaaat
aagctcattaagcataatctccggcttgttttgtttgtgataaacaaatattttcaagat
tttgcaaatggtccaagatttcaagacctttgtcaggcaggagtcaaaggacttattaca
gccattgatcgctttgaaccgagaaggaaattccggctttcgacgtatggccttttttgg
attaggaatgcaattatacgttcaatgacaatatcaaacttcacccgtgtcccgtttgga
cttgaatctgttagagtagaaatccatagagccaggctggaattgttgttagaacttcaa
agagaaccaacagatgatgaagtaatcgaaaaggttgggatctctcctgagagataccaa
gaagtaatgagggcctcaaaatcggtggggtctcttcattcgaggcattcggtcacacaa
gaagagttcattagtggaataaccgatgttgatgctgtcggcggtgatcaccggaggcaa
cctgctcttctcaggcttgcacttgatgatgtgcttgattctctgaagccgaaagagagc
ctggtgatcaggcagagatacgggctagatggtaaaggtgatagaacattaggagaaatt
ggtgggaacctaaatatttcgagagagatggtccgaaagcacgaagtaaaggcgctgatg
aagctcaagcatccggcccgagtcgactatcttcgccggtatgtcgcctga
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