Hibiscus syriacus (Rose-of-Sharon): 120184860
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Entry
120184860 CDS
T09559
Name
(RefSeq) autophagy-related protein 16-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120184860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120184860
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120184860
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120184860
Others
Specific organelles associated proteins
Auto phagosome
120184860
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120184860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ATG16
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR41
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_NWD2_C
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR54
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF12
Cytochrom_D1
B-prop_COPA_B_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
eIF2A
PEP5_VPS11_N
FPP
VPS8_N
Filament
Beta-prop_IP5PC_F
WD_LRWD1
CALCOCO1
CCDC93_CC
Fez1
TSC22
TPR_MLP1_2
Rab11-FIP3
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
120184860
NCBI-ProteinID:
XP_039045159
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MFLRSQEELARDAIKHALKALKKRHLLEEGAHAPAYIALSRPIISQGSEWKDKAESLELE
LQQCYKAQSRLSEQLVVEVAESRALKASLQEKETTIAELEKELTQTRDECSQLKTDLEEN
IRAMELVTIEHQELKAQLEQVTIRVKDLEAENKMLVDRWMLQKMQDAERLNEANALYEDM
IERLKASGLEKLAREQVDGIVRRSEEGAEFFAESTVPSVCKHRINAHEGGCASILFEYNS
GKLISGGHDRSVKMWDTSTGSLIQNLSGCLGSVLDLAITHDNRFVIAASSSNNLFVWDVN
TGQIRHSLTGHKDKVCAVDVSKVSSRHVVSAAYDRTIKVWDLQKGYCTNTIVFHSNCNAL
CFSTDGLTICSGHVDGNLRLWDIQTGKLVSEVAAHSLPITSISLSRNGNVVLTSGRDNLH
NLFDIRSLEVCGTFKATGNRVASNWSRSCISPDDNYIAAGSADGSVYIWSISKADIVSTL
KEHTVPVMSCTWSGLGKPLISADKNGVVCIWT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcaggtcgcaagaggagttagctagggacgctataaaacacgctctgaaggct
ctgaagaaacggcatttactcgaagaaggagctcatgctcctgcatatattgctctttcc
aggcccatcatctctcagggttcggaatggaaagataaagctgaaagcttggaactggaa
cttcaacaatgctacaaagcacagtctagattgtccgagcaactagtggttgaagtagct
gagtctcgagctctaaaagcctctctacaagagaaagaaacaactattgctgaattggag
aaggaattgacccaaaccagggatgagtgctctcagttaaaaacagatttagaagaaaat
attagagctatggaattggtgacgatcgaacaccaggaactcaaagctcaattagagcaa
gtgactatcagagtaaaagatttagaggctgaaaataaaatgttagttgatcgttggatg
cttcagaaaatgcaggatgctgaacggcttaatgaggcaaatgcactttacgaagatatg
attgagcggctcaaggccagtggtttagaaaaacttgcccgagagcaagtagatggtatt
gtccgtagaagtgaagaaggtgctgagttcttcgcagaatctactgttccttctgtttgc
aagcacaggatcaatgcccatgaaggtggttgtgcttcaatactgttcgagtataattct
ggaaaattgatcagcgggggacatgatcgatcggtcaaaatgtgggatactagcaccggg
tctttaatccaaaatctttctggctgcctcggttctgtccttgatctcgcaattacccat
gacaatagattcgtaatagcagcaagcagttcaaacaacttgtttgtatgggatgtcaac
acaggacaaatccggcattctctcacaggtcacaaggataaagtttgtgctgtggatgtg
agcaaagtttcgagtcgtcatgttgtgagtgcagcgtatgatcggacgataaaagtgtgg
gatttgcagaaaggttactgcaccaacactatagtttttcacagcaactgcaatgctctt
tgcttcagcacagatggactgaccatatgctcgggtcatgtcgatgggaatctccgtttg
tgggatattcagaccggaaaattagttagtgaagttgcagcacattcacttcccattaca
tctatctccctgtctcgaaacggaaatgttgtattgacgagtggcagagataatttgcat
aatttattcgatatacgatctttggaagtttgtggtacattcaaagcaactggaaacagg
gtggcatctaattggagtcgctcatgtattagtccggatgacaattatattgctgccggc
tctgccgatggatccgtttacatttggtcaatatcaaaagctgacattgtaagcactctg
aaggagcacactgttccagtaatgtcttgtacttggagtggactcggaaaaccattaatc
tctgcagataagaatggggttgtctgtatctggacatga
DBGET
integrated database retrieval system
