Hibiscus syriacus (Rose-of-Sharon): 120185014
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Entry
120185014 CDS
T09559
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120185014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120185014
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120185014
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120185014
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120185014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
120185014
NCBI-ProteinID:
XP_039045281
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MFGTTNPFGQPTSSPFASQSALGQSNPSSNPFASNSSFGSPTPFGSQTGGSIFGGTSTGV
FGATQPSSPFSSTTTFGASSSPAFGSSMPAFGSSSSSFGGSSAIGQKPAFGFGSTPTQSS
PFGNTAQQSQPAFGSGIFGSSTPFGSTQSAFGATSNPAFGATSTPAFGATSTPAFGATSN
PAFGATSTPAFGATSTPAFGSTGSPAFGSTGTAFRGSSTPAFGTSNTPAFGASASAFGGS
ATTAFGASSTPSFSFGSSPAFGQSTSAFGSSPFGTTTVGAQSSPFGSQSSSPAFGSTTFG
QSAFGGQRGGSRAAPYTPTTDADGGTGTQPAAKLESISAMPVYKDKSHEELRWEDYQSGD
KGGPQPSAQPSGGIGFGVSAAPTPAPAPANPFGGSSSFGQTSANPFSSTSANPFSLKPPS
FNSTSLSTSATTSNPFQPTSSSLFGPTSSTPPSIFSSTTSTFGTGSSPFGSSFTPSFSSS
PSIFGTGAAPATTPTFATGLNFSSSNASSVFNSTPAIGQTTSTFGQNTSNFGINAPSSGF
GGNVFSSSPSLAPNNAAGFGSVTPSFASPFQPTQTAGAFSFSNLGQTQSGGGSSIFGQSN
VGVPSMTQSAAVVQPVTMTISNPYGTLPAMPQISISWSGSAPSVQYGISSMPVMDKPAPV
RISPLLTSRHLSQRRIRLPARKYHPNNENPKVPFFNDDEETPSKPKADAVFIPRENPRSL
VIHPAENWSSRTSLEKPLPLEDTSTPVHENGKILSIAEVFNLFAISNMNLLIGMILVENP
AENGLVKEQIHHNQKANGVHERVADIEARMPKLQQSDYYTEPRIEELAAKERAEPGYCSH
VKDFVVGRHGYGSIKFLGETDVKGLDLEFLVQFNNREVIVYMDDSKKPPVGQGLNKPAEV
TLLNIKCFDKRTRQQYTEGPKVEKYKDMLKKKAKDQGAEFISYDPVKGEWKFRVNHFSKY
RLEEEEEEEEMCAVAGC
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaacgaacccttttgggcaaccaacaagtagcccatttgcatcccaatct
gctctcggccaatccaatccaagtagcaatccatttgcatctaattcttcctttggtagt
ccaaccccttttggctcccaaacagggggttcaatatttggcggtacttctactggcgtg
tttggtgcaacccaaccttcttctccattttcctcgacaacaacctttggcgcatcatca
tctcctgcgtttggaagttctatgcctgcttttggaagttcatcttcatcttttggtggc
tcttctgctattggtcagaagccagcatttggttttgggtctactcctactcaatcaagt
ccttttggaaacacagcacaacaatcacagcctgcatttggtagtggtatatttggatct
tccacaccctttggttcaactcagtctgccttcggtgccacgagcaaccctgccttcggt
gccacgagcacccctgccttcggtgccacgagcacccctgccttcggtgccacgagcaac
cctgcctttggtgccacgagcacccctgccttcggtgccacaagcacccctgcttttggt
tcaactgggagtccagcatttgggagcactggaactgcatttcgaggatcaagcacacct
gcttttggtacatctaacactcctgcttttggagcttcagcttctgcttttgggggttca
gccactactgcttttggagcatcttctactccttccttcagctttgggtctagccctgct
tttgggcaatcaacatcagcatttggtagtagtccttttgggacaactacagttggagca
caaagttctccttttggaagccagtcttcgtctcctgcatttggaagcacaacctttggc
cagtctgcctttgggggtcaacgtgggggaagtagagcagctccgtacacgcctactact
gatgcagatggtgggactggtacacagcctgctgcaaagttggagtccatatcagcgatg
cctgtttacaaagataaaagtcatgaggagctcagatgggaggattatcagtctggagat
aaaggtggtccacaaccgtctgctcagccttctggaggaattggatttggtgtgtcagct
gcacctacacctgcacctgcacctgctaatccttttggcggctcttcatcatttggtcaa
acatctgcaaatcctttttccagcacaagtgccaatccatttagtttaaaacccccatcc
ttcaatagtacaagtttgtcgacctcggctactacatcaaatccttttcaaccaacatca
tctagcctttttggcccaacctcatcaacaccaccttcgatatttagttcgacaacttct
acatttggaactggttcatctccttttggatcatctttcactccttcattttcatcttcg
ccatccatatttggtaccggtgctgctccagcaacaactcccacatttgctactggtttg
aattttagcagcagcaatgcatcttctgtgttcaattctacacctgcaattgggcagaca
acctctacatttggacaaaatacaagtaattttggtatcaatgcaccttcctctgggttt
ggtgggaacgtgttttcgagttctccgtcattggctcctaacaacgctgctggctttggc
tcagtaactccctcttttgcatcaccttttcagccgacacagactgctggtgcttttagc
tttagtaatcttggtcagacgcaatcaggtggtggatcaagcatttttggtcagagtaat
gttggcgtaccgtctatgacacaaagtgctgctgtagtacaacctgtgactatgactatc
agtaatccctatggaaccctccctgcaatgcctcaaatatcaattagttggtctgggtca
gcaccatccgttcaatatgggatttctagcatgcctgtcatggacaaacctgctcctgtt
agaatatcgcccttattgacttctcgacacctttcacaaagacggattaggctgcctgca
agaaaatatcatcctaataacgaaaatccaaaggttccatttttcaatgacgatgaagag
acaccgagcaaacctaaggctgatgcagtttttattcctagggaaaacccaaggtctctg
gtcattcatcccgcagagaattggtcatcaagaacatctctagagaaacctttacctttg
gaggatacatccactccagtacatgaaaatggtaagatactttcaatagccgaagtattt
aacttatttgctatttctaatatgaaccttttgattggcatgattcttgtagaaaatcca
gctgaaaatggccttgtgaaggagcaaattcatcataaccagaaagctaatggagtccat
gagcgtgtggctgacattgaggctcgaatgccaaagctccagcagtctgattactataca
gaacctagaatcgaagaactggcagcaaaggaaagggctgaaccagggtactgtagccat
gtcaaggactttgtggttgggcggcatggttacggaagcatcaagtttctgggagagacg
gatgtgaaaggccttgatctggagttcctcgtccaattcaacaaccgcgaggtaattgtt
tacatggatgacagcaagaaacctcctgttggacaaggtcttaataaaccggcagaagta
acacttctcaacatcaaatgctttgacaagaggaccagacagcagtatacagaaggacca
aaggttgagaaatataaggacatgcttaagaagaaggccaaggaccaaggagccgagttt
atctcgtatgatcctgtcaaaggagaatggaagttcagggtaaatcacttcagtaagtac
aggttggaagaggaagaggaagaggaagagatgtgtgctgttgcaggttgctga
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integrated database retrieval system
