Hibiscus syriacus (Rose-of-Sharon): 120185057
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Entry
120185057 CDS
T09559
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
hsyr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120185057
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120185057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120185057
04131 Membrane trafficking [BR:
hsyr04131
]
120185057
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
hsyr04091
]
120185057
Chaperones and folding catalysts [BR:
hsyr03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120185057
Membrane trafficking [BR:
hsyr04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
120185057
Autophagy
ER-phagy
Other ER-phagy associated proteins
120185057
Lectins [BR:
hsyr04091
]
L-type lectins
120185057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calreticulin
DUF4834
DUF6479
CFAP143
PFF1_TM
FAM176
Motif
Other DBs
NCBI-GeneID:
120185057
NCBI-ProteinID:
XP_039045316
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MTGRFALFLFLAFASFQFLCFAADDDTVFYESFDEPFDGRWIVSDKDDYKGVWKHSKSEG
HDDYGLLVSEKARKYAIVNDLDKPVSLKDGSTVLQFETRLQNGLECGGAYLKYLRPQEAG
WKAKEFDNESPYSVMFGPDKCGGTNKVHFILKHKNPKSGEFVEHHLKYPPSVPSDKLTHV
YTAILKPDNEVRILIDGEEKKKANLLSGDDFEPPLIPAKTIPDPDDKKPEDWDERAKIPD
PSAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEEVDDPEATKPEDWDDEEDGEWESPKI
DNPKCEAAPGCGEWKRPMKMNPAYKGKWSAPLIDNPNYKGIWKPQEIPNPDYFELEKPDF
EPIAAIGIEIWTMQDGILFDNILIAKNEKVAESYRETAWKPKFEVEKEKQKVEEEAADPD
GLSGFQKKVFEVLYKVADIPFLSEYKLQILDVIEMAEKQPNITIGVIVSIVVIILTVLFK
LIFGGKKQPRVEKEPEAAEASNKESTSGEKTEEEEKEENAAAPRRRRRET
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacggggcgtttcgctcttttccttttcctggctttcgcttcatttcagttcctctgc
ttcgccgccgatgatgatacggtcttttatgaatcatttgatgagccgtttgatggacgg
tggatcgtctctgataaagatgattataaaggtgtatggaagcattccaagagcgaaggg
catgatgattatggccttcttgtgagcgagaaggcccggaagtatgcgatagtgaatgat
cttgataagcctgtgagtctcaaggatggaagcactgtacttcagtttgagactcgcctc
cagaacgggctcgaatgtggtggtgcatatttgaaataccttcgtcctcaagaggctgga
tggaaggctaaggaattcgacaatgaatccccttactccgtcatgtttgggcccgacaaa
tgtgggggcacgaacaaggtgcacttcatcttaaagcacaagaatcctaaaagcggagaa
ttcgtcgaacatcatcttaaatatccaccctctgttccgtctgacaagcttactcatgtc
tatactgctatcttgaagcctgacaatgaagttagaattctgattgatggtgaggagaaa
aagaaggcgaacttactctcaggtgatgattttgagcctccacttatcccagctaagaca
attcccgatccagatgataagaaacccgaggattgggatgagagagccaaaattcccgac
cccagtgctgtaaagccggatgattgggatgaggatgcacccatggaaatcgaagatgag
gaagctgtgaaaccggaaggatggttagatgatgagcctgaggaggtagatgatcctgag
gcaaccaagccggaagattgggatgatgaagaagatggtgagtgggaatcccccaaaatt
gataacccaaagtgtgaggcagcccctggttgtggtgaatggaagagaccaatgaagatg
aatcccgcttacaagggaaaatggtctgctccactcatcgataaccccaattacaagggt
atttggaagcctcaggagattccaaaccccgactactttgagcttgagaagcccgacttt
gagcctattgctgctattggtattgagatctggacaatgcaagatggcatattgtttgac
aacattttgatagccaaaaacgaaaaggttgctgagtcctacagggagactgcatggaaa
cccaagtttgaggttgagaaagaaaagcagaaggttgaggaagaagctgccgatccagat
ggactttctgggttccagaagaaggtctttgaagtcctatacaaggttgctgatattcct
ttcttgagtgaatacaagcttcaaatccttgatgtcattgaaatggctgagaaacaacca
aatatcaccattggtgtcatagtctctatcgtggttatcatcctcacagttctcttcaag
ctcattttcggtggcaagaagcaaccaagagtcgagaaagaaccagaggccgcggaggca
tcaaacaaggagtccacgagcggagaaaagactgaagaggaagagaaggaagaaaatgcc
gctgctcctcgcaggaggagacgtgaaacttga
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