Hibiscus syriacus (Rose-of-Sharon): 120185727
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Entry
120185727 CDS
T09559
Name
(RefSeq) DNA-directed RNA polymerase subunit beta'-like
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120185727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120185727
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120185727
Enzymes [BR:
hsyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120185727
Transcription machinery [BR:
hsyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
120185727
DNA repair and recombination proteins [BR:
hsyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
120185727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
120185727
NCBI-ProteinID:
XP_039045801
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDMNELYRRVIYRNNTLT
DLLTTSRSTSGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRF
RETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLAPNIGVAK
SKIREKGPIVWEILQEVMRGHPVLLNRAPTLYRLCIQAFQPILVKGRAICLHPLVCKGFN
AYFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNR
RGICANRYNPWNRKNYQNERIDDNNYKYTREPFFCNSYDAIGAYRQKIINLDSLLWLQWR
LDQCVIASREAPIEVHYESLGTYHEIYGHYLIVRSSKKNSLYIHSNHCWSYFSLPRNRRS
YTRLIDHFGMAYTSHIMDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLIL
EKYHHFGNVYAVEKLRQSIEIWYATSEYLRQEMNPNFRITDSFNPIHIMSFSGASTHAAH
PCSLLFIAVAVDEPPPDQITIDDTNTNDTTTRRTPNRRFKPDENNTKIIKLKLLDDFGDN
HDNMGKNE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaattggctaagcattttattcgaacaaatatagaaccagaatggatggttttatgt
ctattaccggttcttcctcccgagttgagaccgatcattcagatagatgggggtaaacta
atgagttcggatatgaatgaactctatagaagagttatctatcgaaataatactcttacg
gatctattaacaacaagtagatctacgtcaggggaattagtaatgtgtcaggaaaaattg
gtacaagaagccgtggatacacttcttgataatggaatccgcggacaaccaatgagggac
ggtcataataaggtttacaagtcattttcagatgtaattgaaggcaaagagggaagattt
cgcgagactttgcttggcaaacgagtcgattattcgggacgttctgtcattgttgttggc
ccctcactttcattacatcggtgtggattgcctcgcgaaatagcaatagagcttttccag
acatttgtaattcgcggtctaattagacaacatcttgctccaaacataggagttgctaag
agtaaaattcgggaaaaagggccgattgtatgggaaatattgcaagaagttatgcgggga
catcctgtattgctgaatagagcgcctactctgtatagattatgtatacaggcattccaa
cctattttagtgaaaggacgcgcgatttgtttacatccattagtttgtaagggattcaat
gcatactttgatggggatcaaatggctgttcatgtacctttatctttagaggcgcaagca
gaggctcgtttacttatgttttctcatatgaatctcttgtctccagccattggggatccc
atttctgtaccgactcaagacatgcttattggcctctatgtattaacgagcgggaatcgt
cgaggtatttgtgcgaataggtataatccatggaatcgaaaaaactatcaaaatgaaaga
attgacgataataactataagtatacaagggagccttttttttgtaattcctatgatgca
attggagcttataggcagaaaataatcaatttagatagtcttttgtggctccagtggcga
ctagatcaatgtgttattgcttcaagagaagctcccatcgaagttcactatgaatctttg
ggtacctatcatgagatttatggacattatctaatagtaagaagttctaaaaaaaattct
ttgtatatacattcgaaccactgttggtcatatttctctttaccgagaaatcgaagaagc
tatacaagattaatagatcacttcggaatggcatatacatcccacatcatggatcaagta
aaaactctgggtttccagcaagccactgctacatccatttccttaggaattgatgatctt
ttaacgataccttctaagggatggctagtccaagatgctgaacaacaaagtttgattttg
gaaaaataccatcattttgggaatgtatacgcggtagaaaaattacgccaatctattgag
atatggtatgctacaagtgaatatttgcgacaagaaatgaatcctaattttaggattact
gactcgtttaacccaatccatataatgtctttttcaggagctagtactcacgccgcccac
ccatgttcgctattgttcatcgctgttgctgtcgatgaacctccacctgaccaaatcacc
attgatgacacaaacaccaacgacacaaccactcgaagaacccctaatcgacgatttaaa
cccgatgaaaataataccaaaattataaaattgaagctactcgatgactttggcgacaac
cacgataacatgggcaaaaatgaatga
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