Hibiscus syriacus (Rose-of-Sharon): 120185814
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Entry
120185814 CDS
T09559
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120185814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120185814
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
120185814
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120185814
DNA repair and recombination proteins [BR:
hsyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120185814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
120185814
NCBI-ProteinID:
XP_039045854
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MPELPEVEAARRAVEENCLGKKIKRAIIADDSKVIEGVSSSEFESALISKTIVSAHRKGK
NLWLLLDSPPFPTFQFGMAGAIYIKGVAVTKYKRSAVKDNDEWPSKYSKFFVELDDGLEL
SFTDKRRFARVRLLNDPTSVPPISELGPDALFEPMTVDEFMESLSKKKIGIKALLLDQSY
ISGIGNWIADEVLYQARIHPLQISSSLSKENCATLHKCIKEVIETAVEVGADSSQFPSNW
IFHSREKKPGKAFVNGKKIDFITAGGRTSAYVPELQKLSGTLASKAADKPRKQASKRKEG
KAEEDGDGDEPSSEEEETTETTKSKKGASREKKNQDDARSEEDDEDPKEKSGKVKTKTSN
KQEKSAKTSKQAASSRNSKKPKRAK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccagaggttgaggccgccagaagagcagtagaagagaattgcttgggc
aagaagatcaagagagcaattatagccgatgactctaaagtcatcgaaggagtctcctcc
tcggagttcgagtccgctctcataagcaagaccatcgtctcggctcaccggaagggcaag
aacctttggctcctgctggattcccctccttttcctactttccagttcgggatggctggt
gctatttatataaaaggtgttgctgttacaaaatataagaggtctgcagtaaaagacaat
gatgaatggccttcaaaatattcaaagttctttgttgaactagatgatggtttggagcta
tctttcacagataagaggcgatttgctagagtccgcttgctcaatgatcctacatctgtg
cccccgatatctgagcttggccctgatgcactgtttgagcctatgacagttgatgaattt
atggaatccttaagcaagaagaagattggcattaaagccctattgcttgatcagagttat
atctcaggaattggcaactggattgctgatgaagtgctataccaagcaaggattcatcct
ctgcagatttcttcaagcctgtccaaagaaaactgtgcaacattacacaagtgcatcaag
gaggttattgaaacagcagttgaagtcggggcagatagtagtcagttcccaagtaattgg
atatttcattctcgtgaaaagaagcctgggaaggcttttgttaacgggaagaaaattgat
tttatcactgctggtggcaggacatcggcatatgtaccggagttgcagaagttgagtgga
acattagcttcaaaagcagcagacaaacctagaaagcaggcttctaagagaaaagaaggt
aaggccgaggaagatggcgatggtgatgaaccttcgagtgaggaagaggaaaccaccgaa
actaccaaatctaaaaagggagcctcccgtgagaagaaaaaccaagatgatgctagaagt
gaagaggatgatgaagatccgaaagagaaatccgggaaggttaaaactaaaaccagtaac
aaacaagaaaagtctgcaaagacatccaagcaagcagcgagcagtcgaaatagtaagaag
ccaaaaagagctaagtag
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