Hibiscus syriacus (Rose-of-Sharon): 120186390
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Entry
120186390 CDS
T09559
Name
(RefSeq) nijmegen breakage syndrome 1 protein-like
KO
K10867
nibrin
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120186390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsyr03032
]
120186390
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120186390
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120186390
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120186390
BRCA1-C complex
120186390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
PTCB-BRCT
YmgD
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
120186390
NCBI-ProteinID:
XP_039046261
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MVWALLPVDPSSAEEIGEEDKYYIFKKGTYTVGRKGCDVIIHKDKGVSRIHAHIMVDGMT
QSSQVTIKDLSKYGTFINKNLTSNKKVHQFPNKQTSLEDGDLLSFGTGNATLRFSYVPLV
FYICCAEASHMSHYLEDKVSSIGARLINAYNEDCTHVIVDQHMPLKRDVLDAIVDKKPLL
HTSWLELVADKSIHTEFPDCRPHVPKIMVDGVVVEVADPKTRENCLGEYTFLLESTHVYN
FGDRLQSLLEVSGSRVIWVKDIRSNNQAFERGENTCCTYVAPGRSADKFDRLDKLGLSYR
VNEMALIRALLSGKLDHSMLISSSVPVSSCSTDETVVADSEEENETATSVNANSTIQNKG
ARTYVNRGISMEFPSYVSKAEVSTCHDTSKLEDGIKTSKDDNCCLTARRDKADEAEYGSS
SIVYSQVLIVRDVNVSSRSSYKADNGVINYKRFRKASIQSGNSFSNLVPFSKYPYKDYEF
GSGELSESVKEEKKRKKMDAIADDMFNSEKGGRQRGLSGSLRRGGLHMRG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggctttgcttcccgtcgatccttcgtcagctgaagaaataggagaagaagat
aagtattatatcttcaagaagggaacgtatactgtgggtcgaaaagggtgtgatgtcatc
attcacaaagacaagggcgtgtccagaatccatgctcacataatggtcgatggaatgact
caatcatctcaagttactatcaaagatttgtccaagtacgggacattcattaacaagaat
ctcacttctaacaagaaagttcatcaatttcctaataaacagacctctctggaagatggg
gaccttctttcttttggaactggaaatgcaaccttaagattctcttatgtgccgcttgta
ttctacatctgctgtgctgaggcctcccatatgagtcattatcttgaggacaaagtttca
tccattggtgctcgtcttattaatgcctacaatgaagattgtactcatgtgattgttgat
caacacatgcccctgaaaagggatgtacttgatgcaattgtggataagaaaccgctttta
catactagttggcttgagcttgtagctgacaaaagtatccacactgagtttcctgactgc
cgaccccatgttccaaaaataatggtggatggagtagttgttgaagttgcagacccaaaa
acgcgtgaaaattgtttgggagaatacacctttttgttagaatctactcatgtgtacaat
tttggggatagattgcagtcactactagaagtgagtggctcaagggttatctgggttaaa
gacattcgttcaaataatcaggcttttgagcgcggagaaaatacttgttgtacttatgtt
gctcctggaagatcagcagacaagtttgaccgcttagataaactaggtttgtcatataga
gtgaatgagatggcattaattcgtgctcttttatctggaaaattggatcactctatgttg
atatcatcatcagttcctgtttcttcttgctccactgatgaaactgtagtagctgattca
gaagaggaaaatgaaacagctacatcagttaatgcaaattctactattcaaaataaagga
gctcggacttatgtgaacagaggaatttccatggaattccctagctatgtgagcaaagca
gaagtttctacatgtcacgatactagtaaattggaggatggcataaaaacctccaaagat
gataattgttgtttgacagcaagaagagataaggccgacgaggctgaatatggaagttct
agtattgtttatagccaagttctaatagttagagatgtaaatgtaagttcgagaagtagc
tataaagctgacaatggggttataaactacaagcgctttcgcaaggcaagcattcagtca
ggaaatagcttcagcaatcttgttccattttcaaaatatccttacaaagattatgaattt
ggaagtggggagttgtctgagtctgttaaagaggagaaaaagagaaagaagatggacgcc
attgcggatgacatgtttaacagtgaaaaggggggaagacagcgtggtttatcaggttct
cttcgtcgtgggggacttcatatgcggggttga
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