Hibiscus syriacus (Rose-of-Sharon): 120187302
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Entry
120187302 CDS
T09559
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120187302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120187302
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120187302
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120187302
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120187302
PBAF complex
120187302
GBAF(ncBAF) complex
120187302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120187302
NCBI-ProteinID:
XP_039046974
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MNNNNNLPKTFGTPSQFGNSGTVPKPQSISINNQPHPTQGGPQFPGHFQLSEPQAQVLAR
AQYVQAHAQSQAQPQAAAHSQFPAQVHSQNVSNSNAEAIPSPLVSTPGSGSVKRSSQKPP
SKNSGSSNSNMASLFKTVELTPAAPRKRQKLPERQIPDKVAAILPECALYTQLLEFEAKV
DAALSRKKSDIQQSLKNPSCIQKTLRIYVFNTCSNQGTADPDQKSTEAPSWSLKIIGRIL
EDGKDPVLAGKAQKSYPKFSSFFKKITIYLDASLHPDNHVILWESARSPALHEGFELKRK
GDKESTVRIRIEMNYCPERFKLSPALTELLGIEVDTRPRILGAIWHYVKSKKLQNYEDNS
TFSCDPPLQKVFGEEKMKFIMVSQKISQHLTPLSPIHLEHRIKLSGNCPIGSTCYDVQVD
VPLPLEMEKSAFLADMEKNKEIDACDEVICTAIKKMHKHCRRRAFFLGFSQSPAEFINAL
ISSQGKDLELFAGEANHNADKERQSEFYNQPWIEDAVIRYLNRKSIGGDSLGST
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaacaataaccttccaaagacttttgggactccatcccagtttgggaattct
gggacggtgccaaaaccgcaatcgatttccataaataatcagcctcatccaacgcaaggt
gggcctcagtttccgggccactttcaattgtctgagcctcaagcacaggtgcttgcacga
gcacaatacgtgcaggctcatgctcaatcgcaggctcaacctcaggctgccgctcattcc
caattcccagctcaggtgcactcgcaaaacgttagtaatagtaatgctgaggccatccct
tcccctttggtttccactcctggctcaggaagtgtcaagcggtcttctcagaagccacct
tcgaaaaattctggttcatctaatagtaatatggcttctctgtttaaaacggtggagtta
accccggctgctcctagaaaaaggcagaagcttccagagagacaaatacctgataaagtg
gctgcaatattaccagagtgtgctctatatactcagttgcttgaatttgaggctaaggtg
gatgctgctttgtcgagaaagaagtctgacattcaacagtctcttaaaaacccttcctgt
attcagaagactcttagaatatatgttttcaacacgtgttccaatcagggaacagccgac
cctgaccagaagagcactgaggctccatcatggtcacttaagattattggtaggatattg
gaagatgggaaagacccagttctggctggaaaggcacagaaatcatacccaaaattctcg
tctttctttaagaaaattacaatatacttggatgcaagtctccatccagataaccatgtg
attttatgggagagtgctcgatcgcctgcccttcacgaggggtttgagttgaagaggaaa
ggagacaaggaatctactgtgagaataagaatagaaatgaattattgtcctgaaagattt
aaactttcacctgctctcacagaactcttgggaattgaagtagatacacgtccaagaatc
ttgggtgcgatctggcattatgtgaaatcaaagaagttgcaaaattatgaagataactcc
accttttcatgcgatccacctctgcagaaggtattcggggaagaaaaaatgaaattcatt
atggtttcacaaaagatatcacagcatttaactcctctatcccccatacatttggagcat
aggatcaagctttcagggaactgtcctatcggatccacttgttacgatgtccaggttgat
gtgcctttaccattagaaatggaaaagtctgcattcttggcagacatggaaaagaacaaa
gaaattgatgcttgtgatgaagtgatttgtaccgccataaagaaaatgcataagcattgt
cggagacgagctttcttccttggtttcagccagtctcctgcagaatttattaatgcttta
atttcttcccaaggcaaggatttggagctttttgctggagaagctaaccataatgctgac
aaggagcggcaatctgaattctataaccaaccatggattgaagatgctgtaatccggtac
ctgaaccgcaagtctattggaggagactctcttggaagcacttga
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