Hibiscus syriacus (Rose-of-Sharon): 120187891
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Entry
120187891 CDS
T09559
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120187891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120187891
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120187891
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120187891
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120187891
PBAF complex
120187891
GBAF(ncBAF) complex
120187891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
120187891
NCBI-ProteinID:
XP_039047421
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MSMNGNNPPKGLGASSSPFGNTGMEPPSMPGNPGFSQAQHSAGFQAQYQLSHAQALAQAQ
SKAQAHAQLQAHLQAQGLSLNQAQNAGIGNLGLSSPYMSTPGSASAKRVLQKSPMLPPVV
PMMNTMSPLRTMELASAARRKKQNLPDKQLQDRVAAILPESALYTQLLEFEAHVDAALTR
KKVDIQEALKNPPCVQKTLRIYVFNSFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDP
DQPGFVNKTNHLYPKFSSFFKRVTISLDQRLYQDNHIIIWEHARSPTPNEGFEVKRKGDK
EFTVNIRLEMSYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNTNDPSFFN
CDAQLFKVFGEEKVKFTMVPQKISQHLSPPPPIHLEHKIKLSGNNPVGTACYDVLVDVPF
PIQRDLSALLSNAEKSKEIEACDEAICATIKKIHEHRRRRAFFLGFSQSPVEFINALIES
QSPDLKMAAGEASRSAEKERRSDFFNQPWVEDAVIRYLNRRPAVGSDAPGST
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaatgggaacaatcccccaaaaggccttggggcgtcttcgtcgccatttgga
aacacggggatggagcctccttctatgcctggaaaccctggattctcacaagcacagcac
agtgctggttttcaagctcaatatcagctatcccacgctcaggctcttgctcaggctcag
tcgaaagctcaggctcatgctcaactccaagcacacttacaagctcaaggtttgtccctt
aaccaggctcagaatgctggcattgggaatttaggtttgtcttctccgtacatgtctact
cctggcagtgcaagtgcaaagagggtccttcaaaaatcccccatgctccctcctgttgtt
cctatgatgaacacaatgtcacctttgcgaacaatggaacttgcatctgctgcacgaaga
aagaagcagaatcttcctgacaaacaactacaagatagagtggcagcaattcttcccgaa
tctgctttgtatacccagcttcttgaatttgaggcacatgtcgatgcagcattaactagg
aaaaaagttgacattcaggaagcacttaaaaacccaccttgtgttcagaaaactcttcgc
atatacgttttcaactcatttgctaatcagatcaagactattcctcagaagcctaatgct
gagcctcccacgtggacccttaagattattgggagaatcctggaagatggagtagatcca
gatcaacctgggtttgttaataaaacaaaccatttatacccaaaattttcatctttcttc
aagagagtaacaatttccttggaccagagactatatcaagataatcatatcattatatgg
gagcatgctcgatcgcctacgcctaatgaaggttttgaggtgaagagaaaaggagataag
gagttcactgtgaatatacggttggaaatgagttatgtgcctgagaagttcaagctttct
tcagctttgatggaagtcctcggtattgaggttgacacacgccccagaattattgctgca
atttggcattatgtgaaggctagaaaacttcaaaacacaaatgatccgtctttcttcaat
tgtgacgcacaactttttaaagtttttggggaagaaaaagtgaaatttacgatggttccg
cagaagatatcacagcatttgtctcctccaccacccatacatttggagcacaagatcaag
ctttctgggaataatcctgttgggactgcatgctatgatgtcttagtggatgttcctttt
cccatacagagggacctctcagctcttttgtcaaatgcagagaagagcaaagagatcgag
gcttgtgatgaagcaatatgtgccaccataaagaaaattcatgagcaccgtagaaggcga
gcattctttctaggtttcagtcaatcaccagtggagtttattaatgctttaattgagtct
cagagcccagatttgaaaatggcagctggggaagctagtcgaagtgctgaaaaagaacga
cgatcagatttcttcaaccaaccatgggttgaagatgctgttatacgttatttgaatcgc
aggccagccgttggaagtgatgctccaggaagcacttga
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