Hibiscus syriacus (Rose-of-Sharon): 120187907
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Entry
120187907 CDS
T09559
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120187907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120187907
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120187907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ
Motif
Other DBs
NCBI-GeneID:
120187907
NCBI-ProteinID:
XP_039047431
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MPALSNFSSRWIGRRQFQISPRDNSDHGGGDNINEDTPIPNAIECYACTQVGLPIFHSTS
CDQAHPPQWEACAGTSLVPIHARTCPKKNSVQTSARQPTRPSFGGRRRVLDPRSKRVQKW
NRAFLLARAMALAIDPLFFYALSIGRDGSACLYMDGGLAVIVTVLRTCVDAVHLFHVWLQ
FRLAYVSRESLVVGCGKLVWNPRAIASHYVRSVKGFWFDAFVILPVPQAVFWLVVPKLIE
EEQIRDIATILILIFLFQFLPKVYHSISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASH
VAGGCWYVLTMQRIALCLRQQCARNEQCGKLSLSCGAGDSSKVTGRPLCFDVKGPFGYGI
YQWALPVVSSNSVAVKILYPIFWGLMTLSTFGNILEPTSHWLEVVFCICLVLAGLMLFTL
LIGNIQVFLLAVMAKKRQMQLRCRDMEWWMKRRQLPSRLRQRVRRFERQRWATLGGEDEM
ELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKLFREGD
PVQRMVFVVHGRIQRTQSLSKGMIATSIIKPGGFLGDELLSWCLRRPFIDRLPVSSATFV
SVESVEAFGLDSDHLRYITYHFRYKFANERLNRTARYYSSNWQTWAAVNIQLAWRRYRMR
DRGPMISAAEHRSSSDHRLLQYAAMFMSINLHDHLE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctgtccaatttctccagccggtggattggacgtcgtcagtttcaaatctct
ccccgggacaactctgatcacggaggcggcgacaacatcaacgaagacaccccaattccc
aacgccatagaatgctacgcttgcactcaagtgggactcccgattttccactccaccagc
tgtgaccaagctcacccgccccaatgggaagcctgcgccggcacttccctcgttccgata
cacgccagaacttgcccaaagaagaactcggttcaaacctccgctcggcaaccaactcgt
ccgtcgtttggcggacggagacgggtgctcgacccgaggagcaagcgggtacagaaatgg
aaccgggcatttctgctggctcgtgcaatggccttagccattgaccctctattcttttat
gccttgtcaataggcagagatgggtcggcttgtttgtatatggacggtgggcttgccgtc
atcgttaccgtcctccggacgtgtgtggatgccgtgcatctgttccacgtatggcttcag
ttcaggttggcttacgtgtcgagggagtccctcgtcgtcggatgtgggaaactggtctgg
aacccacgtgccattgcttctcattatgttcgttccgttaaaggtttctggtttgatgcc
tttgtaattctcccagttcctcaggcagtgttctggttggttgtaccaaaactaatcgag
gaagaacaaatcagggatatagccactatactgatattgatcttcttgttccaattcctg
ccaaaggtttaccatagcatttccttgatgagaaggatgcaaaaggtcactggatatatc
tttggcaccatctggtggggttttggccttaatctcattgcctacttcattgcttctcat
gttgccggagggtgctggtacgtccttacaatgcagcggatagcgttgtgtctccggcag
caatgtgcgagaaatgagcagtgcgggaaactatctttgtcttgtggtgctggtgactct
tcaaaagtcactggaaggcctttgtgcttcgacgtcaaaggaccattcggttatgggatt
tatcagtgggctcttcctgttgtttctagcaactcggttgctgtcaagatcctttatccc
atattttggggcttaatgactctcagcacctttggaaatattctggagccgacaagtcac
tggctagaagtggttttctgtatatgcttagtgctggctggtttgatgctcttcactttg
ctcatcggaaacatccaggttttcttgcttgctgtaatggcgaagaagagacaaatgcag
ctgagatgtcgagatatggaatggtggatgaagcgtcggcagttgccgtctcgattgaga
caaagagttcggcgttttgaacgacagcgatgggcgactttggggggagaagatgagatg
gaattgatcaaagacttgcccgagggcctccggagggacatcaaacgttatctttgtctt
gacctcatcaaaaaggttcctttgttccacaatttggatgatcttattcttgataacata
tgcgaccgagttaagccgcttgtcttctctaaagatgaaaagctatttagagaaggagat
ccagtgcaaagaatggtgttcgtagttcacggacgcattcaacgtacccaaagcctgagc
aaaggcatgattgccacaagtatcatcaaaccaggtggctttttaggtgatgagctgctc
tcatggtgtcttcgccgaccatttatcgaccgtcttccagtctcgtccgcaacattcgtt
agcgtggaatcggtcgaagcatttggtcttgattcagaccatctcagatacatcacatat
catttcaggtacaaatttgctaacgaaaggcttaacagaactgcgagatactattcatcg
aattggcaaacatgggctgctgtgaatatacaactcgcctggaggcgttaccggatgagg
gatagaggtccgatgatttccgctgcggagcacagaagcagcagtgaccaccggttgctg
caatatgctgctatgttcatgtcaatcaatttacatgatcatctagaataa
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