Hibiscus syriacus (Rose-of-Sharon): 120188044
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Entry
120188044 CDS
T09559
Name
(RefSeq) amino acid transporter AVT1A-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120188044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120188044
Transporters [BR:
hsyr02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
120188044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120188044
NCBI-ProteinID:
XP_039047519
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MADEVKEKHVEEFVLESDDNEDDLEGSKAGYGSECSLNYNSDDDGDGGRRGPSTTFTSQQ
WPQSFKETMDPYTITASPSFGIIGGIQNLRHFSFTSQKSNLELDGRLPLLNENRKSYSKE
TLESISRAQSGWSQRPSFPKQLTGEFPISYGCSVTQTVFNSINVMVGVGLLSTPHTIAEA
GWASLLVLVFFAVVCCYTATLMKYCFESREGIISYPDMGEAAFGRFGRLLISIVLYTELY
SYCVEFIIMEGDNLTRLFPGVSLDWPFLKLDSMHLFGILTALVILPTVWLKDIRLISYLS
AGGVVATLVIGLCLLYLGTLGGVGFHHTGKAVNLSGIPVVIGVYGFCHSGHSVFPNIYQS
MADKSQFKKAMQICFFLCIVLYGSVAVMGYLEFGQSTLSQITLNMPPHAFVSKIALWTTV
INPLTKYALLLIPLVRSIEELLPDHVVDSLWFFILLRAVLVFSTVVIAFVMPFFGLLMVL
IGSLLSFMVALIMPSLCFIKIAGRKASRIDVVLSATIVVIATVCAIVGTYTALRGIVNNY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaggttaaggagaagcatgttgaggagttcgtcctggaaagtgatgataat
gaggacgatcttgaagggagcaaggccggctacggcagcgaatgcagcctcaactacaat
agcgatgatgatggtgacggaggccgacgaggtccttctaccactttcacttcacagcaa
tggccccaaagtttcaaagaaacaatggatccttatacaatcacggcatcaccaagcttt
ggaatcattgggggaattcaaaatttgagacattttagttttaccagtcagaaaagtaat
ttggaactggatggaaggcttcctcttttgaacgagaatcgaaagagttattccaaggaa
actttagagagcatctcaagagcacagtcagggtggtcacagaggccatcattccctaag
caacttactggagagtttcccatttcttatggatgtagcgtgacccagaccgtatttaat
tccataaatgtaatggttggagttgggcttctatccacacctcatacaatagcagaagca
ggctgggcaagcttgttggttctagtcttttttgcagttgtatgttgttacacagccaca
ctcatgaaatattgctttgaaagcagagaagggattatatcttaccctgatatgggtgaa
gctgcctttggacgatttggacgccttttaatatctattgttctctatacagaattatat
tcttattgtgtggaatttattatcatggaaggtgacaatcttacaaggctatttcctgga
gtttctttggattggccttttctaaagttggattcgatgcatctctttggaattttaact
gccttggttattctacccactgtctggttaaaagatattcgtctgatttcatatctttca
gctggtggggttgttgcaacattggtaataggcctttgtcttctgtatctcggtacactg
ggtggtgttggcttccatcatactggtaaagctgtgaatttgagtggcattcctgttgta
attggtgtgtacggattctgtcattcaggacactctgtgtttccaaatatctatcaatca
atggctgataaatcacaatttaagaaagcaatgcaaatatgtttctttttgtgtatagta
ttgtacggaagtgttgcagtcatgggttatcttgagtttggtcaaagcacattgtctcaa
ataactttgaatatgccaccacatgcttttgtttctaaaattgcgttgtggacgacggtt
atcaacccactcacaaaatatgcattattgttgatccccttggtgaggagcatagaggag
ctgctaccagatcatgtcgtggatagcttatggtttttcattcttctgagagcagtatta
gttttttccaccgttgtcattgcatttgtcatgcctttctttggtcttctgatggtttta
atcggttctcttctaagcttcatggtggctctaataatgccatcactatgcttcataaag
attgccgggagaaaagcttcaaggatagatgttgttttgagtgcaacaatcgttgtaatt
gccaccgtgtgcgctatcgttgggacgtatactgcattgcgtgggattgtgaataattac
tga
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