Hibiscus syriacus (Rose-of-Sharon): 120188666
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Entry
120188666 CDS
T09559
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120188666
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsyr04812
]
120188666
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
120188666
Membrane trafficking [BR:
hsyr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120188666
Cytoskeleton proteins [BR:
hsyr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120188666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_5
RuvB_N
AAA_14
NPHP3_N
AAA_22
AAA_16
TIP49
Mg_chelatase
DUF815
AAA_2
RNA_helicase
AAA_25
nSTAND3
IstB_IS21
PknH_C
MIT
TniB
nSTAND_NTPase5
AAA_33
AAA_24
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
120188666
NCBI-ProteinID:
XP_039048008
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MDMSFIKGIIDSLSSIISTDTSPLESKQNPSSSTCQNMEAGNERTAYKLKGYFDLAKTEI
DKAVRAEEWSLVDDAVVHYQNAQRILVEASSTPTPSYISSSELEKVKSYRQKISKWKGQV
SERLQVLSRRSGGTFVNKNTLTHAQTAAVPPRTSNSKSPRNPVVRNHIDRVESSKSAQEP
TNSYESKLVEMINTAIVDRSPAVKWDDVAGLEKAKQALMEMVILPTRRRDLFTGLRRPAR
GLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKLVRTLFMVAISKQPS
VIFMDEIDSVMSTRLANENDASRRLKSEFLIQFDGVTSNPNDLVIVIGATNKPQELDDAV
LRRLVKRIYVPLPDDNVRKLLLKHKLKGQQFSLPGRDLERLVRETEGYSGSDLQALCEEA
AMMPIRELGSNILTVKENQVRPLRYEDFQKAMSVIRPSLNKSKWEELEQWNQEFGSN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatatgagtttcatcaaaggcataatcgactctctaagctcaatcatctcaaccgat
acctcaccacttgaatcaaaacaaaatcctagttcatccacgtgtcaaaacatggaggct
ggaaacgaacgcaccgcatataaactcaaaggatacttcgatttggccaaaacagagatc
gacaaagctgttcgagcggaagaatggagtttagtagacgatgccgtggttcactaccaa
aacgctcagcgaattctggtcgaggctagctcaactcccacaccttcatatatcagctct
agcgaactagaaaaggtgaaatcatataggcaaaagatatcgaaatggaagggccaagta
tctgagagattacaggttttaagtcgccgatcaggaggcacattcgtgaacaagaacacc
ttaacccatgcacaaactgctgcagttccaccaagaacatcaaattctaagtctcctcgt
aacccagtggtgagaaatcatattgatagagttgaaagttcaaaatctgcacaagaaccc
actaatagttacgagtcaaagttggttgaaatgattaatacagcgatagttgataggagc
cctgctgttaaatgggacgatgttgctggccttgaaaaggctaagcaagcattaatggaa
atggttattctaccaactagaaggcgagacttgtttactggacttagaaggccagctaga
ggtctgcttctttttggtcctcctggtaatgggaagactatgcttgccaaagctgttgca
tctgaatcacaggcaacattcttcaatgtttctgcatcctctctaacgtctaaatgggta
ggagaaggtgaaaagcttgttcggacactcttcatggttgcaatatccaaacagccatct
gttattttcatggatgaaattgatagtgtcatgtcaaccaggttggctaatgaaaatgat
gctagcagacggttgaagtcagagtttttaatccagttcgatggagtgacatccaatcct
aatgatttagtaattgtcattggtgccactaataagccacaggaattggatgatgctgtt
cttagaagattggttaagaggatatatgtaccccttccggatgacaatgttagaaaactt
cttcttaaacacaaactcaagggtcaacaattttccctacctggtcgggacctagaacga
cttgtgagggagacagaaggatattctggaagtgatctgcaagcattatgtgaagaagca
gctatgatgccgattagagagcttggttcaaatattcttactgtcaaggaaaatcaggtg
agacctctaagatatgaggactttcagaaggcaatgtctgttattaggcccagtttaaac
aaaagcaagtgggaagaactcgaacagtggaatcaggagtttggctctaattga
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