Hibiscus syriacus (Rose-of-Sharon): 120188776
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Entry
120188776 CDS
T09559
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120188776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsyr04040
]
120188776
Ion channels [BR:
hsyr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120188776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
120188776
NCBI-ProteinID:
XP_039048107
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MTFRRESFVRFQDWNSDDGLFQMKVRPSFHAVMGCLQRVFKKGSERIRSFKKPISFRSSG
SNPTSTTDKAKAFGSNKRILNPQGQFLQTWNKMFLFSCAIALAVDPLFFYIPVVDGHRKC
LNLDHRLEITASVLRTIIDAFYILHMIFQFCTAFIAPSSRVFGRGELIEDPWAIAKRYLP
KYFIIDVLAILPLPQVVLLVIIPKIKGPDPLVTKDLLESIIFAQYVPRIIRIFPLYKEVT
RTSGILTETAWAGAALNLFLYMLASHVVGAFWYLISIEREDSCWSNAIGEGEESALYCDN
HTTTVNTTLVKLLNASCPFINPDDIKDFKAFNFGIFIDALESGVVETWDFPKNALLANLY
LLSYFSSLGQNLKTSTFVWEVLFAIVISIGGLVLFSLLIGNMQKYLQSTGVRVEEMRVRR
QDAEQWMSHRMLPDSLRERIRKYEQYKWQETRGVEEEALISNLPKYLRRDIKRHLCLDLL
KRVPMFEKMDERLLDAMCDRLKPALYNDKSYIVREGDPVEEMLFIIRGNLISTTTNGGRT
GFFNSVHLKAGDFCRDDLLTWALDLQSSSNFPISTRTVQALTEVEAFALMADDLKFVASQ
FRRLHSKQFRNTFKFYSVQWQTWAASFIQAAWRRYCKRKLTKSLREADDKLQDALAKESG
TSPSLDATLYASKFAANALRTLQKNGPRNTSRPQRLPPLLPQKPAEPDFAAEHS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactttccggcgagaaagctttgtaaggtttcaagattggaattcagatgatggatta
tttcaaatgaaagttagaccctcatttcatgcagttatggggtgtctccagagagtattc
aagaagggttctgaaaggatcagaagctttaagaaaccgataagtttccgttcttccgga
agtaatccgacatcgacaactgacaaggcaaaggcatttggttcgaataagaggattctt
aatccacaaggacagtttcttcaaacatggaataaaatgttcctcttctcatgtgccatt
gctcttgcagtggaccctttgttcttttacatccccgtggtcgatggccatcgcaagtgt
cttaacttggatcacagattggaaattactgctagcgtacttcgaacgatcatcgacgcc
ttttatatacttcacatgatctttcagttctgcactgcatttattgccccgtcgtctcgg
gtattcggtaggggtgaattgattgaggatccttgggcaatagcaaagagatacctgccc
aagtacttcatcattgatgttctggcaattcttccactcccacaggtggtactcttagtt
ataattcccaaaatcaaaggcccagatccattggtcacaaaggacttattggaatccatt
attttcgcccaatatgttccaagaattattcgaatcttccctctttacaaagaagttaca
aggacttctggcatacttactgaaacagcatgggctggagctgctttgaatctcttcctc
tacatgctagccagtcatgtagttggggccttctggtacttgatctcaatagaacgagaa
gacagctgctggagtaacgccataggcgaaggtgaagaaagtgcattgtactgtgataac
cacactacaactgtaaacaccacattagtgaaattgctgaatgcttcatgcccttttata
aatcctgatgacataaaggatttcaaggccttcaactttggtatattcatcgatgcactc
gagtcgggggtggtggaaacctgggattttccgaagaatgctttgcttgctaacttgtac
ttattgtcctattttagttctctgggtcagaatcttaaaaccagcacttttgtgtgggaa
gtactctttgctatagtgatttccattggtgggctggttctgttttcactgcttattggg
aatatgcagaaatatctgcagtcgaccggagttagagtcgaggagatgagagtgagaagg
caagatgcagaacaatggatgtcgcatcgaatgcttcctgatagcctcagggaacgtatt
aggaaatacgaacagtataaatggcaagaaaccagaggggttgaagaagaggcgttgatt
tcgaaccttccgaaatatctcaggagggatataaagaggcatctttgcttggatcttctc
aagagagtgccaatgtttgaaaaaatggatgagcgactattagatgcaatgtgtgatcgt
ctcaagccggcactttacaacgacaagagctacatcgtccgggaaggggatccagtagag
gagatgttgtttatcatcagaggaaatctaataagtacgaccaccaatggtggaagaact
ggtttcttcaattctgttcatctgaaggctggtgatttttgtagagatgatcttcttaca
tgggccctggatctccaatcgtcatccaactttcctatctcaactagaaccgtgcaggcc
ttaaccgaagttgaagcctttgctttaatggctgatgacttgaagttcgtagcctcccag
tttcggcgtcttcacagcaagcagttccggaacacattcaagttttactcggtgcagtgg
cagacttgggcagcatcttttatacaagcagcgtggcgccggtactgcaagaggaaactt
acgaaatcccttcgtgaagcggacgataagttgcaggacgctttggcaaaagagtccgga
acctcacctagtctcgatgccactctctatgcatcaaagttcgctgccaatgcattacga
acattgcagaaaaatggtccgcgaaacaccagtcggcctcaaagattaccaccactgctt
cctcaaaaacctgccgagcctgattttgcagctgaacatagctaa
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