Hibiscus syriacus (Rose-of-Sharon): 120189059
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Entry
120189059 CDS
T09559
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120189059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120189059
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120189059
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
120189059
NCBI-ProteinID:
XP_039048323
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MCVVFSFLFGLSLMHKKMEFPFPDEVLEHIFSFIQSDKDRNSVSMVCKSWYEIERWCRRK
VFVGNCYAVSPRMVSRRFPEFRSIELKGKPHFADFNLVPDGWGGYVFPWIVEMAGAFPWL
EEIKLKRMVVTDESLELIAKSFKKVKVLVLSSCEGFSTDGLGAIAASCKNLEELDLVDCE
VDDLSGHWLSHFPESYTSLVSLNISCLVSDEVSFSALERLVGRCTNLRTLRLNRAVPLDK
VADILRRAPQLVEFGTGTYAAELRPDVYSDLAGAFSSCKELKSLSGFWDVVPDYLPAIYP
VCSKLTSLNLSYATIQSPELIKLVSHCPNLQRLLVLDYIEDSGLEALASSCKDLQELRVF
PSDPYGVEPNVSLTERGLVAVSSGCPKLMSVLYFCRQMSNEALVTIAKNRPNFTRFRLCI
IEPRTADYLTHEPLDVGFGAIVQYCKELQRLSLSGLLTDRVFEYIGKYAKKLEMLSVAFA
GDSDLGLHHVLSGCESLRKLEIRDCPFGDKALLANAARLETMRSLWMSSCAVSFGACKLL
GQKMPRLNVEVIDERGPPDSRPESCPVDKLYIYRTIAGPRFDMPPFVWTMEDDPSLLLS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttgttttttcttttcttttcgggctttcattaatgcataagaaaatggagttt
ccgttcccagatgaggtgcttgagcacatcttctcgttcatacaatcggataaagaccgg
aactcggtgtcgatggtgtgtaaatcgtggtacgagatcgaaaggtggtgtcggaggaaa
gtgtttgtggggaattgctacgccgtgagccctcggatggtgagcagacggttcccggag
tttagatccattgagctgaaagggaaaccgcacttcgcggacttcaatctagttcccgac
ggatggggtggttacgtgttcccatggatcgtcgagatggccggcgctttcccttggctc
gaagagattaagcttaaaaggatggtagttaccgacgaaagtttggagcttattgctaag
tcgtttaagaaagtcaaagtgttggttctttcatcttgtgaagggttttcaactgatgga
cttggcgccattgctgctagttgcaagaatctggaagagctggacttggtagactgcgaa
gtggatgatttgagtgggcactggctcagtcatttccccgagtcgtacacgtccctggtg
tctctcaacatttcttgcttagtgtccgatgaagttagtttctcggccttggagcgcctg
gtgggtagatgtaccaaccttaggacgcttcggctcaaccgtgcggtgcccctggataag
gttgccgacattttgcgtcgtgcaccgcagctggttgagtttggcactggtacctacgct
gcggagctaaggccagacgtctactcggatttggctggagcattttctagttgcaaggaa
ctaaagagcttgtctggattttgggatgtggtcccggattaccttccagccatttaccct
gtctgttctaaattaacatcgctgaacttgagctacgctacaattcaaagtcccgagctt
atcaagcttgtaagccactgtccgaatttgcaacgcctattggtgcttgattacattgaa
gatagtggccttgaagcgctcgcatctagttgcaaggatttgcaagagttacgcgtgttt
ccatctgatccatatggtgtagagccaaatgtgtccttgacagagcggggccttgttgcc
gtatcttcgggttgtcctaagcttatgtcagttttgtacttctgccgccagatgtctaac
gaggcattagtcaccattgccaagaatcgtcccaacttcacacgttttcgtctttgtata
attgagcctagaacagcggattacctgacccatgagccacttgatgttggttttggagcc
attgttcagtactgcaaggaactccagcgcctttccctctctggtctcctcacagatcgt
gtgttcgaatatatagggaaatatgcgaaaaagctcgagatgctatctgtggcttttgcg
ggagatagtgatttgggactccaccacgtgctttctgggtgtgaaagcctccggaaactg
gagattagggactgtccctttggggacaaggctcttttggccaatgctgcaaggctggag
acaatgcgatccctttggatgtcttcttgcgctgtgagtttcggagcatgcaaactttta
ggtcagaagatgccaaggttgaatgttgaagttatagatgagaggggacctccggattca
agaccagaaagctgcccggttgataaactctacatatatagaaccattgccgggccaagg
tttgacatgcctccttttgtttggacaatggaagatgatccatcattgctgctttcttga
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