Hibiscus syriacus (Rose-of-Sharon): 120189087
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Entry
120189087 CDS
T09559
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120189087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120189087
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120189087
Complex C
U4/U6.U5 tri-SnRNP related factors
120189087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
120189087
NCBI-ProteinID:
XP_039048350
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHSDSPYIRAIGFLYLRYAADPKTLWTWFEPYIK
DEEEFSPGSSGRMTTMGIYVRDLLLGQYYFDTLFPRIPVPVLRQVVSHLEKMKLPTKTSG
STGDNSLHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPYERSNGDD
VRSPSHRRSQSRDREYSDKDGDWNRKTDRDRERERGRDRDRDHDHDRQRDRSRDRDHDRD
HNRERERERRHDYDRRSRYMDKRDIDDSRRYRSRSRSPSLSGNRSRSQSEKGGNSHYEPP
HKEASKASSNLAKLKDLYGDTKGDGGYERAANRDSSGEEVIRLGGSWR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacgtgtggtaagccgattgattcattgttggagaaggtgctttgtatg
aatatactatcctctgattatttcaaagagctttaccgattaaagacttaccatgaagtc
atcgatgaaatctataatcaagttgatcatgttgaaccgtggatgactgggaactgtcga
ggtccttctactgcattctgccttctttacaagtttttcaccatgaaacttaccgtcaag
caaatgcacgggctactgaagcactctgattctccttacattagagcaattggattcctt
tacttgaggtatgctgccgatccgaagactttatggacttggtttgaaccatacattaaa
gatgaagaggaattctctcctgggtctagtggacgaatgaccaccatggggatatacgtg
cgtgatttgcttcttggacagtactacttcgatactcttttcccccgaatccctgttcct
gttttgcgtcaggttgtatcccatcttgagaagatgaagctgcccactaaaacatctggt
tcaactggggataatagtcttcatggatctgatgacaccgctcgccgcccaccttctgta
aaagctgcactttcagtctcttttggtcagcgagcaccgcatcgggcatcaaccagggac
tcttctcctgtgcgtcgcactctacctccacctccttatgaaaggtccaatggtgacgat
gtaagatctcccagccaccgtcgcagccaaagccgtgatagagaatattctgacaaggat
ggggactggaatcgcaaaacagatagggatagggaaagggagaggggcagagaccgagac
cgggatcatgaccatgataggcaacgagacagaagcagggaccgagatcatgaccgtgat
cacaatagagaaagggagagggaacgaagacatgattatgatcgaagatcaaggtacatg
gataaaagggacattgatgacagtaggcgttacaggagcagaagccgaagtcctagtttg
agcggaaacagaagcagaagtcagagtgagaaaggtggaaacagtcattatgaaccacca
cacaaggaggcaagcaaggcatccagcaatttagcaaagctgaaggatctttacggtgat
acgaagggagatggtggctatgaaagggcagcaaacagggacagcagtggagaagaggtg
attagactaggtggttcatggagatag
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