Hibiscus syriacus (Rose-of-Sharon): 120189112
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Entry
120189112 CDS
T09559
Name
(RefSeq) protein SLOW WALKER 1-like
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120189112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120189112
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120189112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120189112
NCBI-ProteinID:
XP_039048379
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MAEIRAEEQTSTISKTFLIKPKLKSKPRTLPQTPESKYWSSFKSTQIPNLVSSIYSLSFS
PSPPHPFAAAYSATVSLFSPLSLSDGDVSPSSTISFSDVVSSLSFRSDGLLLAASDLSGL
IQVFDVKTRTPLRRLRSHTRPVRFIKYPVVDKLHLLSGGDDAVVKLWDVAGESVVLDLLG
HKDYVRCGDCSPVSSDLFVTGSYDHTVKVWDVRVDNSKSVLEVNHGKPVEDVIYLPSGGL
IATAGGNSVKIWDLIGGGRMIHSMDSHNKTVTSICVGRTRKENCGDEYMEDRILSVGLDG
YMKVFDYGNMKVTHSMRFPAPLMSVSFSPDCRTRVIGTSNGIIFAGRRKGKENVESGGRR
NILGFESISEPEVLRPRYFRYFHRGQSEKPAEGDYLVMRNKKIKLAEHDKLLKKFRHKDA
LVSVLNKKNRENVIAVMEELVTRKKLLKCVSNLDIDELGLLLMFLSKNATMPRYSSLLMG
LTKKVIEMRAEDIQNSDALKGHIRNLKRSIEEELRIQHSLQEIQGIISPLLRITGRR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatcagagcagaagaacagacatcaacaatctcgaaaaccttcttgatcaaa
ccaaagctaaaatccaagccaagaaccctaccccaaactccagaatccaaatactggtct
tctttcaaatccactcaaatccctaacctcgtctcctccatctattccctttcattttcc
ccttcgcctccccatcctttcgccgccgcctactccgccaccgtttccctcttctccccg
ctctccctctctgacggcgacgtttcaccttcatctaccatctccttctccgacgtcgtt
tcttctctttcattccgttccgacggcctcctcttagccgcttccgatctctccggtctc
atccaagtcttcgatgtcaaaactcggaccccacttcgtagactccggtctcatacccgc
ccggttcggttcattaagtacccggttgtcgataagctccatttgctgtccggaggtgac
gatgctgtcgttaaattatgggatgttgctggagaaagcgtggttttggatttgctgggc
cataaggattacgtgcggtgcggtgattgtagtccggtaagttctgatttgttcgttact
ggttcttatgatcatactgttaaggtttgggatgttagagtggacaattcgaagtcggtt
ttggaagttaaccatgggaaaccagtggaagatgtgatttatttgccttcgggtggatta
attgcaactgctggtgggaattcagtgaagatatgggatttgattgggggcgggaggatg
attcattcgatggatagtcacaataaaactgttacatcgatttgtgttggaagaactagg
aaggaaaattgtggggatgaatatatggaagataggattttgagtgttggtttagatggt
tacatgaaggtttttgattatggtaatatgaaggttacccattcgatgcgatttcctgct
cctctaatgtcggttagtttttcgcctgactgtaggactagagtgatcggaacatcgaat
gggatcatatttgcagggagaaggaaagggaaggagaatgtggagagtggaggaagaaga
aatattttgggttttgaaagtatatcggaacctgaagttttgaggcctaggtattttagg
tattttcacagaggacagagtgagaagccagccgaaggggattatttagtgatgagaaat
aagaagatcaaactggccgagcatgataagttattgaagaagtttaggcataaggatgca
ttggtttcggttttgaataagaagaaccgggagaacgtgattgctgtaatggaggagttg
gtgacaaggaagaagttattgaaatgtgtatcgaatttggacattgacgagctcgggtta
ttgttgatgtttttgagtaagaatgccacaatgccaaggtattctagtttgttgatgggg
ttgacaaagaaggttattgaaatgagggccgaagatattcaaaattcagatgctttgaag
ggtcatattcgaaatcttaagcggtcaatcgaggaagagctaaggatacagcattccttg
caggaaatacagggtataatctctcctttattaaggattactggaagaagataa
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