Hibiscus syriacus (Rose-of-Sharon): 120189228
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Entry
120189228 CDS
T09559
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120189228
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120189228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
120189228
NCBI-ProteinID:
XP_039048477
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MEIADASENGSRNIQPTMDTVSDPSETISNNTAAEKWPGWPGHCVFRLIVPVTKVGSIIG
RKGELIKKMCEETRARIRVLDGAVGTPDRIVLIAGKEEPEAPLSPAMDAAIRVFKRVSGF
PDNDTDAKAVGATFCSIRLLVASTQAISLIGKQGSLIKSLQESTGASVRVLSGEETPSYV
VADERIAELQGEALKVLKALEAVVGHLRKFLVDQTVLPLFEKTHNSMGTQDHQAETRSEK
SSLLTASQSGIGIDLPIRRDSLFLEHEKQFEQRIPSSGISFYGQDPALSMVRSSSGLHRS
AVPIVTQIAQTMQIPFSYAEDIIGIGGVNIAHIRRTSGAIITVQESGGLSDEITVEIKGT
SIQVQLAQQLIQEFMSNHKDPITSGGSYRDTGYRPSSFSQLGYTPSLSSQQPYGGYGGSS
SVRLLDDLMEPLRYDSPPFAADLRLRFQHK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgccgacgcctcggagaacggttcgagaaatatccagccaacgatggataca
gtatccgacccatcagaaacgatctccaacaatacagctgcagagaagtggcccggctgg
cctggtcactgcgtgtttcggctcatcgttccggttacgaaagtcggcagcataattggc
cggaaaggtgagctcatcaagaagatgtgcgaggaaacccgcgcccgtatccgcgtcctt
gatggcgctgttgggactcccgatcggattgtgctaatagctggaaaggaagaaccagag
gcacctctttcccctgcaatggatgctgctataagagttttcaaacgtgtctctggattt
ccagacaacgataccgatgctaaagcagttggagctacattttgttcgatccgattgttg
gtagcatctactcaagcaatcagtttaattggaaagcaaggctccttaatcaagtcgtta
caagagagcaccggtgcatctgttagggtattgtcaggagaggaaactccatcttatgtg
gtagcagatgagaggattgcggagttgcagggggaagccttgaaggttcttaaagctctt
gaagctgtggtgggccacctgaggaaatttttggttgatcaaactgttcttcctctcttt
gaaaagacacataattcaatgggcactcaggaccatcaagcagagacaaggtctgaaaag
tcatctctgcttactgcttctcaaagtggaataggaattgatcttcctattaggagagac
tctttgttcctggaacatgaaaaacagttcgagcagcgaatcccatcttctggaatttca
ttctatgggcaggatcctgcactttcgatggtgcgttctagttcagggcttcatcgatct
gctgttcctatagttacgcagattgctcaaaccatgcaaattccattttcttatgctgag
gacatcattgggattggaggagttaatattgcacacattcggcgcactagtggagccatc
ataactgtgcaagaaagtggtggcctgtctgatgaaataaccgtcgaaattaaaggcacc
tcaatacaggttcagttggctcaacaactgattcaagagttcatgagcaatcacaaagat
ccgatcacaagtggcggcagctacagagacacggggtataggccctcctcgttttcacag
ttgggctacacaccttcactttcgtctcaacaaccctatggcggatacggaggatcttct
agtgttcgacttttagatgatctaatggagccactacgatatgatagccctccatttgcg
gctgatctccgacttcgatttcagcataagtga
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