Hibiscus syriacus (Rose-of-Sharon): 120189420
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Entry
120189420 CDS
T09559
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120189420
03015 mRNA surveillance pathway
120189420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120189420
03041 Spliceosome [BR:
hsyr03041
]
120189420
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120189420
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120189420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
120189420
NCBI-ProteinID:
XP_039048637
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQARLLKSQKFAPELEHLVNMTKVKMDVIRPWIATRVTELL
GFEDEVLINFIYGLLDEKEVNGKQVQISLTGFMEKNTGKFMKELWTLLLSAQRNASGVPQ
QFLDAKEEEARKKKAESDRIANEIQKKKDGESREREQERLRKMMDERDERKAGDADLDLS
SKNNLPKGSSPHPEDKRGADLRNGVRRKSISKSPCSTDGSPHPRRLLSRSVSRSYSNSRS
NSEDKQKSRNISRSPPPRQRSISNDRMYRSPRRRSLTPRSSCSPTRRRPSYYRRISRSRS
LRRSPSPVRRRFRSPYLRRSPTTVHRKLRSPIRHHRSPSPVRRHRSPLLVRQRRRSPVRY
RRSPSPMRRRSPSPMRRRSPSPIRHRSPSPLHRRSRSPVSHRSPSPIHRRSLLPVRRRYP
NLRRRSPSPVRQRYRRSSTPQHRSSPPVQHKSAASGRRSITLSHDKSPESYQPSSLSPVR
RSSSLVSRLPEERRSPLLSLGERQQMSGKLSPGGRRPSDAIYLQRDPVDQRDADDNVPAI
SLSPNKSPVSKSPLHVRNRSACEDRRSSSPFESPTRKRRELIAHDDSLSLEQKPKELRGQ
RESQETGRKNGASRSRHSPMVNKERVSPWKDHTSEQLAGSWSTESQSRLDDRESRKKDLE
MKSERSSGKGVQLGTPDQSRSPILSEDSFEDKKRSASHLREGKISDDKNRSRRNNIDGDE
HYKAETSPMLHGRVDHNKNGLDPASEGSDKRRTKHKEKRKHKRSERHETTSDDDSSYDSQ
TEDRREAKRRRKEEKRLRKEKRRRRKERRHRREERHAEKLKMKDQDDDSNLDGEDAVKRN
FHPSDDKASPEHKQLEVELRKKALESLKAKKGISG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggatttttccggggtacttcggctgatcaggatacccggttctccaataag
caagcgaggctacttaaatcgcagaaatttgctcccgaattggagcatctggttaacatg
accaaggttaagatggatgttattcgaccttggatagctactcgggtgactgagcttctt
ggtttcgaagatgaagttcttattaactttatctatgggcttctcgatgagaaggaagtt
aatggcaagcaagttcagatatccctcaccggattcatggagaagaatactggcaagttt
atgaaggagctttggactcttctgcttagtgcacagagaaatgcaagtggtgtacctcaa
cagttcttggatgcgaaagaagaagaagctaggaagaaaaaggcagagtcggataggata
gcaaatgagattcagaagaagaaagatggtgaaagtagagaacgtgaacaagagagattg
aggaagatgatggatgaacgggatgaaagaaaggctggtgatgcagacttggacctgtcc
tcaaagaataacctaccaaagggttcaagtccacatcctgaggataagaggggtgctgac
ctaaggaatggtgtccgaaggaagagcatttctaaatctccttgttcaactgatggttct
ccacaccctcgaagattgctttctcgatcagttagcagatcatattctaattcaagaagc
aattctgaagacaaacagaagtctaggaatatatctagatcacctcctcctcggcagcgc
tccatttccaatgataggatgtaccgttccccgagaagacgatctttaactcctcgatca
tcatgctctcccacaagacgaagaccatcttattaccggagaatatctcgatctcgttca
cttcgtagatcaccatctcctgtaagacgaagatttcgttctccttacttgcgcaggtct
cctactactgtgcaccgtaaattacgctcacccattcgacatcatagatcaccatcacct
gttcgacgtcatagatcacccttattggttcgacaacgaagaaggtctcctgttcgatat
cgtagatctccatcacctatgcgtcgtagatctccttcacctatgcgtcgtagatctcca
tcacctatacgtcatagatctccatcacctttacatcgtagatctcgttcgccagtttct
cacagatctccttctcctatacatcgtagatccttgctgcctgtacgtcgtagatatcca
aacttgcgacgtagatcaccctctcctgtgcgacagcggtatcgcagatcttcaactcca
caacataggtcctcacctcctgttcaacataaatcagctgcttctggccgtaggtcgata
actctttcccatgataaatctcctgaatcttatcaaccaagttctctgtctcctgtacgt
cgatcatcttcactggttagcaggttgcctgaggaaagaagatcacctttgctttctctt
ggagaaaggcagcaaatgagtggaaagttgtctcctgggggacgtaggccctctgacgcg
atttatctgcaaagagatcctgtggatcagagggatgcagatgataatgtgcctgccatt
tcactatccccaaacaagtctcctgtctccaaatctcctttacatgtgaggaatcggtct
gcctgtgaagataggaggtcgtcaagtccatttgagagccctacgaggaaaaggagggag
ctaattgcacatgatgatagcttgagccttgaacaaaaaccgaaagaattgagaggccag
cgggagagtcaagagactgggaggaagaatggagctagcagaagcaggcattcaccaatg
gttaataaggagagggtttctccttggaaggatcacacttctgaacaattggcaggcagt
tggtctacagaatctcagagtcggcttgatgatagagaatcaagaaagaaagaccttgaa
atgaagagtgagaggtcttctggaaaaggggttcagttgggaactcctgatcaatcaaga
tcaccaattttatctgaggattcatttgaagacaagaagcgaagtgcatcacacctgaga
gaaggaaaaatatctgacgataagaatcgttcccgtcgaaataacatagatggtgatgaa
cactacaaagcagaaacttcaccgatgttgcatggaagggttgatcataataagaatggt
ttggatccagcttctgaaggaagtgataaacggcgaactaagcataaggaaaagagaaag
cataaaaggtccgagaggcatgaaactacttcagatgatgattccagctatgattctcaa
actgaggacaggagagaggctaagaggagaaggaaggaagaaaagagattaagaaaggag
aagcgtagacgtcgcaaggagcggcgtcacagaagagaagaacggcatgctgagaagctt
aaaatgaaagatcaagatgatgactctaacttggatggtgaggatgcagtaaagaggaac
tttcatccaagtgatgacaaggcatctcctgaacataaacagcttgaagtggagttaagg
aagaaggcccttgaatcactcaaagcaaagaagggcattagtggctga
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integrated database retrieval system
