Hibiscus syriacus (Rose-of-Sharon): 120189448
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Entry
120189448 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin structure-remodeling complex protein SYD-like
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
ResIII
DEAD
DEAD_2
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
120189448
NCBI-ProteinID:
XP_039048664
LinkDB
All DBs
Position
Unknown
AA seq
3299 aa
AA seq
DB search
MASSNNVELEAAKFLHKLIQDSKDEPSKLATKLYVILQHMKSSGKEHSMPFQVISRAMET
VINRHGLDLEALKSSRHPTVGSQAMDSTSGQYVGSSQAVAVSKDSKAGLMQNEIPKFDPF
SSSKPPVGPSIAGHEYYQGVGTHRGSQSFDHGSPSSLDTRSANSQSQDKQMSQNDNKKAA
TATKRKRAESSAPLEPNFDESLNVVIDPRKGKMNKAETSGPANYNMFPSSGQMEHFPSSP
GNMRSMHRSRQDGQNVTENLVDSTNVSNLMSRAPSSKYPEEVEVSSTQNVSRQQQRGLPG
AHEILSSRGKAGLPFDRYQLNRFLQMFLAXMTSEIASQQLMHASLISGSFGKVQGLPAPS
NSYNVGELAYSGSGQFSGSESQKHGFSKSSVASPDGSSSTLSTGKVFEHDGGSSNMLADV
NKITQVGRQNSASEMNMLRAMAPRDMGKSPASQSVTSGMPFKEQQLKQLRAQCLVFLAFR
NGLVPKKLHLEIALGNIFPREDGPRKDLNDHRGKGQTSNEPISISEVAMLYGRMNNAPPA
SASIGRFPEADSLSKEAENLKVGTNGPTSDLSAIVEERKHILAARRAEADIQSQETVEPQ
AYLPTMSRQPDSSTTKDGFTAHTDGVENGHLQIAKADLASSVMGASKQVNPEMMAWSGIG
FHNEASGASFNEVNLCDLVNKVGVCFTTEQVEQNKSVSTGPFPSPKHTMSEKWIMDQQKR
RFLAEQKWVVKQQKTRQRIFTCFTKLKGNVSSSEDISAKTKSVIELKKLQLLELQRRLRS
DFLNDFFKPIANDMERLKSYKKHRHGRRIKQLERYEQKNEEERKEXERQKEFFSEIEVHK
ERLDDVFKVRRERWKGFNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQ
DAKSDRVKQLLKETEKYLQKLGSKLQDAKAIASRFENNMDEVRTASVVENDTAIENEDEA
KHYMESNEKYYLMAHSIKENISEQPTFLKGGKLREYQMNGLRWLVSLYNNHLNGILADEM
GLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPEILKIVYAGPPEER
RRLFKERIVHQKFNILLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK
HYQSSHRLLLTGTPLQNNLEELWALLNFFSQWFNKPFESIGDNSAEEALLSEEENLLIIN
RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGAIGNSKARSV
HNSVMELRNICNHPYLSHLHVEEVDNLIPQHYLPPIIRLCGKLEMLDRILPKLKATDHRV
LFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGNDRGALIEKFNQQGSDFFIFLLSIRAG
GVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVQTVEEQVRAAAE
HKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEETALVLDDDSLNDLLARSESEI
DVFESIDKLRQEEETARWKKLVFGSGMVGSKPLPPLPSRLVTDDDLKAFYEAMKLYDVPK
TRVQPNIGVKRKGGSLGALDTQHYGRGKRAREVRSYEEQWTEEEFEKMCQADSPGSAELK
EEAVERELPKNALMGIVNSTEPHAPSPATAPAPAPAPLPPLPQPVLVELAHQPQQQQNKD
ATPPSKRGRGRPRRAPAEKSPTAPVFPAPYGTSKLDVGLQKATDTSSSAFPAPAPDPGNS
TGVSQIFPPSTPSFSSIPDESIPPGFSPPVESKGQGRRAQSGGQVPRRRGKKKEPAFNPA
VDGSAGPAPETNEQSQIISVNPPDSLAVAISGTVPGVSSAPAAVGTNPIPTSAGPHCTAG
TDHPSDSGSGLNSQTLHTYPATPIAQSALPCTTVPVQVNGQGRKVESGVGTPRRRGKKQA
QISAAPLNASVDQDSKLNPQAHAKSTEASPSKFIGTGGNLENDACDPEKVIQEEGQGTDA
PAIITAQEKHDTIHHNLPQTKQPESSQDVHNSTTIILGPAVGKIHQIDVKEKASLISVVS
SECSSQKAKSSEVCGNQGGAVAVVTGTSVEVVKNQISEAKVHPTISIGKNAPSVSITTTN
SLPASIPLAGANKTIPSSGERISPSSEPYPTSVSAVSETQTVPAFPVESVQSRRPGRKTT
NREEAPRPRGRKPATPDASSGQDLKVNSQPQSTSKDLMVNKATAGKSNLDSGPLELVNVT
QVRASEIHSPSASVDHDSKRKATVAVPAFSRIATADVNDVARVMKEIFSETCTSKNKVGE
PAGSEGKSTTTAPLSSKTFEELVKNQSLDGVSSVSTPNLVKTSPASDVRKVKGKQQTENE
SDTKELEDNASLAIKVPVLERVDSLKPECKTHSGSDNNANPTLIPNESSITDAVIDGMPP
LNAGDMKDVAQGTPTGGDQTVSRIQLSSPSPMDLLQAAESDKTNREPCFKESPKADSDDS
IMDPSLSGVVVPAINVSEAKEESPGMTESIVVEGPETLENSINHGASSAVEDTAPSHEAA
NSDDSPVHNQDLEGHPGGNEAKGDTIPEPATESTDTELVPRNVGALQQSLVVRDKEGDGV
EIHNMEVDPCEREFSSLKDFTAESASRDPAPEENGGMKLPVRVETMKGDSVEVCDPEVKP
LETQLSETDVLPLEIAVPVSDILGDKNVEQFRTDADVKESEEKPPILVMTSTIESVCPVT
QCRDATGPENISGSKQLSSEISKTGSAMEVDCKDHHSANEKEDFDTKGAKSPNGENADLA
VVSSSNQIALFVGSPSKLDHQFNQNETTTQSSSENSPDLTHCDSKDCESTIDSTKASDAC
NISILAPPTSVMMEPKVASSEGKEKASLDSSNSVALDISSSGDGVACDYSGVTAVVPLSS
DHSVPGCLPDPITIQSEDKAEPSTRELLESSFNIGSVIHPEESLPVTACPDKSGTVYIAA
MVENNSECKLEHSPDKSGTLEALAVVENNSELEAEPSLKSHPQASVPDVVNLQSSAMSTK
PDVDDTLVTSNISPGPICSGMVDLPAITENETVKETEPSNGIETMRNSESESVYFASDSS
NVELMPKDDELQQPSAVMVDNSVDVGSEEVDPTAQPASSLKDFAPGNHGEVKPSETHATS
SEVTAKDSPKGERDLNGQSHELLVPEKTHADQVEASTIEPNSVARASSPKSGISDNKEPV
QRSGADHVEACSGKLDTTEGPSSAQTISDESTHPDNKPELTLAYEADVIEACSKGPSSLQ
VISKESTNPELKQNEVRTEFQSEVHAEASQQSKVETADISDMEIDPKEEEKRPFIRIGG
NT seq
9900 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcaaataatgtggagttagaggcagcgaagtttcttcataaactcatacaa
gactctaaagatgagccttcaaagctggcaacaaaactttatgtgatattgcaacacatg
aaatctagtgggaaagaacattcgatgccgttccaagtaatatcaagggcaatggagact
gttatcaatcgacatggtcttgatctggaggctctgaaatcatcccgacatcctactgtt
gggtctcaagcaatggattctacatctggacaatatgttggatcatcccaggctgttgca
gtttctaaagactctaaagcaggtttgatgcaaaatgagatacctaagtttgatccattt
tcatccagcaagccgcccgttggcccaagcattgctggacatgagtattatcaaggagtt
ggaactcacaggggtagccagtcttttgatcatggaagcccatcaagtttggacacccgg
tctgctaactcccaatcacaagacaaacaaatgagtcaaaatgataataagaaggctgca
actgcaactaagcgaaagagggctgagtcatcagcaccattggaaccaaattttgatgaa
tctcttaacgttgttattgatcctaggaaagggaagatgaataaggctgaaacctctggc
cctgctaactacaacatgttcccaagtagtggtcagatggagcattttccatcctcacct
ggaaatatgagatcgatgcatagaagtagacaagatggtcagaatgtaacagaaaaccta
gtggattcaacaaatgttagcaatttgatgtcacgtgctcctagttcaaagtatcctgaa
gaggtggaagtttcatctactcaaaatgtatctagacaacagcaaaggggactacctggt
gcgcatgaaattctttcctctaggggcaaggccgggttaccctttgacagatatcaactt
aacaggtttctccaaatgtttctggcannaatgacatcagaaattgcatctcagcagctg
atgcatgcatctcttatttctggttcttttgggaaggttcaaggattgcctgccccatct
aactcatataatgtaggagaactagcatattcaggttcaggccaatttagcggctctgag
agtcaaaagcatggattttccaaaagctctgtggcaagtcctgatgggtcatcatcgaca
ctttctactggaaaagttttcgaacatgatggaggaagttcaaatatgttagcagatgta
aataagataactcaggttggcaggcaaaatagtgcctcagaaatgaatatgcttagagcc
atggctccaagagatatgggaaagtctcctgcctctcaatctgtgacatctggcatgccc
ttcaaggaacaacagttgaaacagctgagagcccagtgccttgtttttctagctttcaga
aatggcttggtgccaaagaagttgcatcttgaaattgcgcttggaaacatatttccaaga
gaagatggtcctcgcaaagatttgaatgaccacagaggcaaaggtcagacttccaatgag
ccaattagcatatctgaagttgcaatgttgtatggaaggatgaataatgcacctcctgct
tcagcatctataggaagatttccagaggctgattccttgtcaaaagaagcagaaaattta
aaagtggggactaatggcccaacttctgatctttcagcaatcgtggaggaaaggaaacat
attctagctgcaaggagggcagaggctgatattcagagccaagagacagttgaaccacaa
gcatacctacctacaatgtcaagacagcccgattcttccactacgaaggatggttttact
gctcatacagatggtgtggagaatggccatttgcaaattgcaaaggctgatctagcctct
tctgtaatgggtgctagtaaacaagtgaaccctgaaatgatggcctggtctggaattggc
tttcataatgaagcttctggggcatcttttaatgaagtcaacctctgtgatctggtgaat
aaggttggtgtctgttttaccacagagcaagtcgagcagaataaatctgtatcaactggt
ccatttccatctccaaagcatactatgtctgagaaatggattatggatcagcagaaacga
aggttcttggctgagcagaagtgggttgtaaaacagcaaaaaacaaggcaaagaattttt
acttgtttcacgaaattaaagggaaatgtgagctcttctgaagatatctctgcaaaaacc
aaaagtgttatagaattgaagaaacttcaattattagagcttcaacgtcgcctacggagt
gattttctgaatgacttttttaaaccaattgctaatgatatggaacgcctgaaatcatac
aagaaacacagacatggtagaaggataaagcaacttgaaagatatgagcagaaaaatgaa
gaagagcgaaaggaangtgagagacagaaggagtttttcagtgagatagaagttcacaag
gagaggctggatgacgtgttcaaagttaggagagaacgttggaaaggtttcaatagatat
gtgaaggaattccataagagaaaggagcgtatacatcgtgagaagatagacagaatccag
cgagagaagattaacttacttaaaatcaatgatgtagagggttatttgcgaatggttcag
gatgctaaatcggatcgtgttaagcaactactaaaagaaactgagaaatatcttcagaaa
cttggatccaagttacaggatgcaaaggctattgcaagccgctttgagaataatatggat
gaggttcgaactgccagtgtagttgagaatgacactgctatcgagaatgaagatgaggca
aagcattacatggaaagcaatgaaaagtactacctgatggctcatagcattaaagaaaac
atcagtgagcaaccaacatttctcaagggtggaaaattaagagagtatcagatgaatggc
cttaggtggctggtttcactctacaacaatcatctgaatggtattcttgctgatgaaatg
ggtcttggcaaaactgttcaggttatttctcttatttgttatctaatggaaaccaaaaat
gatagaggaccatttttagtggttgtgccatcttcagttctgcctggatgggagtcggaa
atcaatttttgggctccagaaatactcaaaattgtttatgctggacctccagaagagagg
cgcagattattcaaggagaggattgtacatcagaaatttaacattctcttgacaacgtat
gagtatctaatgaacaagcatgatagaccaaagttgagcaaaattcattggcactatatt
ataattgatgaaggtcatcggataaaaaatgcttcttgcaagttgaacgcggacttaaag
cactatcagagctctcatagattgctactgactggaacaccactacagaataatcttgag
gagttgtgggcattgctcaattttttttctcagtggttcaacaagccatttgagagtatt
ggggataattctgctgaggaagcactactatccgaggaggagaatttgttgatcattaac
cgtctccaccaagttcttcgaccttttgtacttcgaaggctgaaacataaggttgaaaat
gaacttcctgagaagattgagaggcttgtaagatgcgaagcttctgcttatcaaaagctt
ttgatgaagagggttgaagaaaatcttggtgcaattggaaattcaaaggctcgatcggtg
cataactctgttatggagcttcgtaacatatgcaatcatccatatctcagtcatcttcac
gtggaggaggttgataatttaataccacagcattatttgccaccgatcattaggctttgt
ggcaagcttgagatgttagatcgaatactccccaagttgaaggcaactgatcatcgggtt
cttttcttttccacaatgactaggctactagatgtcatggaagattatctcacctttaaa
cagtaccgctacctaaggttggatgggcatacatctggcaatgatcgtggtgcacttatt
gaaaagtttaatcaacaaggttctgactttttcatatttttgctcagtattcgggctggt
ggtgttggtgtaaatcttcaagctgctgatactgtgataatattcgacactgactggaat
cctcaggttgacctgcaagcacaagcaagagctcataggattggccagaagaaggatgta
cttgttttacgatttgaaacagttcaaacagtcgaagaacaagttagagctgccgctgaa
cacaaattgggagttgctaatcagagtatcactgctggcttctttgacaataatacaagt
gctgaagaccgtagggagtacttagagtccctcttgcgggagtgtaagaaagaggaaact
gccctagtcttggatgatgattctctaaatgatctgttggcccgcagtgagtctgagatt
gatgtatttgaatcaattgataaactgaggcaggaagaagagacggcaaggtggaaaaag
ttggtatttggatcagggatggttggttccaagcctttaccccctttaccatctcgtctt
gttacagatgatgacttgaaagcattttatgaagcaatgaaattgtatgacgtacccaag
actcgggtacaacctaacattggggtaaaacggaagggtggatcacttggtgctcttgac
acccagcactatgggaggggaaaacgagcaagagaggtgcgttcatatgaagagcaatgg
acagaagaggagtttgaaaaaatgtgtcaagctgactcacctggatctgctgaattgaag
gaagaagctgttgagagggaactgccaaaaaatgctctgatgggtattgttaatagcaca
gaacctcatgccccatccccagccaccgccccagctccagctccagctccgcttcctcca
ctaccgcaaccagttttggtggagcttgcacatcagccacaacagcagcagaacaaagat
gcaacaccaccatctaaacggggccgtggaaggccacgaagagcacctgcagagaaatct
cccactgcaccagtgtttccagcaccttatggaaccagtaaattggatgtcgggttacag
aaagcaacagatactagctcatcagcatttcctgctcctgctcctgatcctggcaatagt
acaggagtttctcagatctttccaccaagtacgccctctttttcttctattcctgacgaa
tctatcccacctggattctctccaccggtagaatcaaaaggacaaggtcgaagggctcaa
agtggaggacaggtgcctcgtcgaaggggaaagaaaaaagagccagcatttaacccggct
gttgatggttcagctggtcctgctccagaaacaaatgagcaatctcagattatatcagtt
aacccaccagatagtctagctgttgctataagtggaactgttcctggtgtttcaagtgct
cccgctgctgtggggaccaatcctatacctacttctgctggtcctcattgtactgctgga
actgatcatccatctgattcagggtctggtttgaactctcagacacttcatacttacccg
gccactccaattgctcaatcagctcttccttgtactactgtacctgtccaagttaatggc
caaggtcgcaaggttgagagtggggtaggaacaccgcggcgtaggggaaagaaacaggca
caaatatcagctgctcctctgaatgcttcagttgatcaggattcaaaattgaatccgcaa
gcacatgctaaatctacagaggcatcaccaagtaaattcattgggactggaggcaatctg
gaaaatgatgcttgtgatccagaaaaggttattcaagaggaaggacaggggactgatgca
cctgctatcataactgctcaggaaaaacatgatactatacatcataatttacctcaaact
aagcaaccagaaagctcacaggatgtgcacaatagtaccaccataatccttgggcctgct
gtgggaaaaattcatcaaattgatgtgaaggagaaggcttctttgatttcagtggtttca
tctgaatgcagctctcagaaagctaagtctagcgaggtatgtggtaaccaaggtggtgct
gtggctgttgttactgggacctcagttgaagtggtaaagaaccaaatttcagaagcaaaa
gtgcatccaaccatttcaattgggaaaaatgcaccttctgtttctattacaacaaccaat
tctttgcctgcatcgattcctttagcaggtgccaataaaaccatccctagttctggtgaa
agaatttctcccagctctgagccttatccaacttctgtttctgctgtttctgaaactcaa
actgtccctgcttttcctgttgaatctgttcaaagtagaaggccaggtcgtaagaccaca
aacagggaagaagcacctaggcctagaggaaggaaacctgcaactcctgatgcttcatct
ggccaggacctgaaagtaaattctcagccccagagtacatcaaaggatttaatggttaat
aaagctactgcagggaagagcaatctagattctggccctcttgagctggtcaatgtcacc
caggtacgtgcatctgaaattcattctccaagtgcttcagttgatcatgattcaaagaga
aaagcaactgttgcagtcccagcatttagtcgaattgcgactgctgatgtgaatgatgtt
gcccgagtgatgaaggagattttctctgaaacctgcacatcaaagaataaagttggcgaa
cctgctgggagtgagggaaaaagtacaaccactgcaccattatcaagcaagacatttgag
gagctagttaagaaccaaagtttagatggtgtttcttctgtcagcacaccaaatcttgta
aaaacttctccagctagtgatgttcgaaaagtaaaaggtaaacagcagaccgaaaatgaa
tctgatacaaaagaactggaggacaatgcatcacttgcgattaaggtccctgttcttgag
agagttgattcattgaagcctgaatgcaagacccatagtggctcagacaacaatgcaaat
ccaacactgattccaaatgaaagttcaattacagatgcggtgattgatggtatgcctcct
ctcaatgctggtgacatgaaagatgtggctcaaggaactcctactggtggtgatcaaact
gtttctagaattcaactgagctcacctagtccaatggacctgcttcaagctgctgagagt
gataaaaccaatagagagccttgttttaaagaatctcccaaagctgacagtgatgattcc
ataatggatccttctctttcaggtgttgtggtacctgctattaatgtttctgaagccaaa
gaagaaagtcccggtatgactgaatctattgttgttgaaggtccagaaactttagaaaac
tcaatcaatcatggagctagttctgcggttgaagatacagctccatcccatgaggctgct
aattcggatgattctcctgttcacaaccaagatttggagggtcatcctggtggcaatgaa
gccaagggggatactatacctgaaccggcgactgaatctactgatacagagcttgttcca
cgaaatgttggagccttgcaacaatctctggtggttagagataaggagggtgatggtgtt
gagattcacaatatggaagtagatccttgtgagagagaattttcttctttgaaagacttc
actgctgaatcagccagcagggatcctgctccagaggagaatggtgggatgaaactgcct
gtcagagttgaaactatgaagggtgatagtgttgaagtttgcgatccagaagttaaaccc
ttagaaacacaattatctgagacggatgttctacctttggaaatagcagttcccgtttct
gatattttaggggacaagaatgttgaacagttcaggacagatgctgatgtaaaagagtcc
gaggagaaacctcctattttggttatgacctctacaatagaaagtgtttgtccagtaact
cagtgccgggatgctactgggcctgagaacatttcaggttcaaaacagctttcatctgaa
atctcaaaaactgggagtgccatggaggttgattgtaaagatcatcacagtgctaacgag
aaagaagattttgataccaagggagcaaaaagtcctaatggagagaacgctgatcttgct
gttgtgtcctctagcaatcaaatagcattatttgtgggatctcctagtaagttagatcat
cagttcaatcaaaatgaaaccacaacacagagctcttcagaaaactctccagatttgact
cattgtgacagtaaagattgtgaatctaccatcgactctacaaaagccagtgatgcttgt
aatatttctattttggccccacctacttctgttatgatggagcctaaagtggccagctct
gaaggcaaagaaaaggcttccttggactcttcaaattcagttgcgcttgatattagttct
tcaggtgatggtgttgcttgtgattattctggtgtgactgcagtagttcccttgagttca
gaccattcagttcctggatgtcttcctgatccgatcacaattcaatctgaagataaagca
gaaccttctactagagagttgttggaatcttctttcaacattggaagtgttatccacccg
gaagagtctttacctgttactgcgtgtccagacaagtcaggtacagtgtacatagctgct
atggttgagaacaattctgaatgcaaattagagcattctccggataagtcaggcacattg
gaggcacttgctgtggttgagaataattctgaacttgaagcggagccttctttgaaatca
catccacaagcctctgtccctgatgttgtaaaccttcaaagttctgcaatgtccacaaaa
cctgatgttgatgatactcttgtgacttcaaatatttcaccaggtcccatttgttcaggg
atggtggaccttcctgctattactgagaatgaaacggtaaaggaaacagagccatctaat
gggattgaaaccatgaggaactcagaatcagaatccgtctatttcgcttctgattcttct
aatgtagaacttatgccaaaagatgatgagttgcaacagccatcagctgtaatggtagat
aattctgttgatgttggcagtgaggaagtagaccccactgcacaaccagcatcttctctg
aaggattttgcacctgggaaccatggtgaggtgaagccctcagaaacacatgcaacttca
tcggaggttactgccaaggactcccccaagggagaacgtgatctaaatggtcagtctcat
gagctcctagtaccagaaaagacacatgctgaccaggttgaggcttctactattgaaccg
aactccgttgctcgggcatcttcaccaaaatctggaatttctgataataaagagcctgtt
cagaggtctggggctgatcatgttgaagcctgcagtgggaaattagacactacagaagga
ccatcctcggcacaaaccatctctgatgaatctacccatcctgataataaaccagagctt
acactggcatatgaagctgatgttattgaggcctgctccaaaggaccatcctcgttacaa
gtcatttctaaagaatccaccaatcctgagcttaaacaaaatgaagtcagaactgagttc
caatctgaagttcatgccgaagcttctcagcaatctaaggtcgaaactgctgacatctct
gatatggaaatagacccaaaagaagaagaaaaaagaccattcatccgaattggaggatga
DBGET
integrated database retrieval system
