Hibiscus syriacus (Rose-of-Sharon): 120189645
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Entry
120189645 CDS
T09559
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120189645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120189645
Spliceosome [BR:
hsyr03041
]
Complex B
Other components
RES complex
120189645
Complex C
120189645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bud13
XRCC4_C
Motif
Other DBs
NCBI-GeneID:
120189645
NCBI-ProteinID:
XP_039048796
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
FRAVGSHRTEHGTLSFGKGKHYPFVQPLPSLKATSSLKEYLKRYETKNEEEDQKKKRKKK
KKTKLESSGVLVVDQDPVWQKPVKAEDDDGNDSPDETPVVDEDIEVKRMKKLEQIRLRRG
YNTIAEDGSGWVSLSPKRANAVDPNSDSSPRRQRTRNDTPSPEPGLRHSNSEIEVKDLSP
TRRSRDDLSPSCRRATRTDLPEPRVKASRDDTDLCPLRKWRVQNDTPSPEPLVNSADGTD
LSPPRKRRVRNDTQSPEPLVNRADVNDLSPPRKRRARNGTPSPKPLVNRADADLSPPRKR
RVRNDTPSPKRRLKPLREGTDSDMSPPRQRSRRQHTQSPEPDMPPPRQSRRQTSELVHDS
DLSPPRKSRESTGPASLKQKPKTGLISGSEIGEQISKTKKDDWLRFKDMDPSVSGRGAEP
VFRDKIKGERMSKEEYLKSKRKGEDKPKEKELEWGKGLAQKREAEARLQELELEKNKPFA
RTRDDPELFNMLKDRLRWGDPVAHLVKKKQPEPVLKDLGDTEKMKESGFIVPQDIPPHSW
IVRKLDAIPNQYGIRPGRHWDGVDHSNGFEKKMFTKLNEKRVTEREAYLWSVSDM
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
tttcgggctgtcgggagtcacaggacagagcatggaaccctatcatttggaaaagggaag
cactacccttttgtgcagcctctcccgtctttgaaggcaacttcaagcttgaaggaatat
ctaaaaagatacgagaccaaaaatgaagaagaggatcagaagaagaaaaggaagaaaaag
aagaaaaccaaactcgaatcctcaggcgtgttggttgttgatcaagatccggtctggcaa
aaacctgttaaggctgaagacgatgatggcaatgattcacctgatgagacacccgtagta
gatgaagatatcgaagtgaaaagaatgaaaaagctagagcagattaggttgaggagggga
tacaatactattgctgaagacggtagtggatgggtctcgctatctcctaaacgtgctaac
gcagtggatcctaattctgatagttcccctcgtaggcagcggacacgaaatgacacacct
tctccagaacctgggttgaggcattcaaactctgaaatagaagttaaggatttgtcacca
acacggagaagtagggatgatttatcaccttcttgtaggagggcaactaggactgattta
ccagaacctcgagtcaaggcatctagagatgatactgatttatgtcctctgcgaaaatgg
agggttcagaatgacacaccatcacctgaacctttagtaaacagtgcagatggtactgat
ttatctcctccacggaaacggagggttcggaatgatacacaatcaccagaacctttagta
aacagagcagatgttaatgatttatctcctccacggaaacggagggctcggaatggtaca
ccttcaccaaaacctttagtaaacagagcagatgctgatttatcaccacctcggaaacgg
agggtgagaaatgatacaccttcaccgaaacggaggttgaagcctttgagagaaggtact
gatagtgatatgtcaccgccacggcaaaggtcaagacgtcaacatacacaatcaccggag
cctgatatgccacctcctagacaatctcgtcgtcaaacatctgagttagttcatgattca
gatctttcccctccaaggaaaagtagggaatcaaccggtcctgcttctttgaaacaaaaa
ccaaaaactggtttaatttctggcagtgagatcggagaacaaatttccaaaacaaagaag
gatgattggttaaggtttaaggatatggatccatctgtgagcggacgaggtgctgaacct
gtatttcgtgataagataaaaggagaacgcatgtcaaaagaagagtacctcaagtcaaaa
cgaaaaggagaagataagcccaaggagaaagagttggaatggggcaaaggcttggcccag
aaacgggaagccgaggctaggttgcaagaattagaactcgagaagaataaaccatttgct
cgaaccagggatgacccagagcttttcaatatgttgaaggatagactaagatggggtgat
cctgtggcgcatttggtcaagaaaaagcaacctgagccagttcttaaagacctaggggat
actgagaagatgaaggaatcggggtttatagttcctcaagatattcctccacatagttgg
atagtaagaaaattagatgccataccaaatcaatatggtataagaccaggaagacattgg
gacggagttgatcatagtaatggttttgagaagaaaatgttcaccaaattgaacgagaaa
cgggtaacggaaagggaagcatacctctggtccgtgtcggacatgtaa
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