KEGG   Hibiscus syriacus (Rose-of-Sharon): 120189893
Entry
120189893         CDS       T09559                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082  ATP-dependent chromatin remodeling
hsyr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120189893
   03083 Polycomb repressive complex
    120189893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120189893
Enzymes [BR:hsyr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120189893
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120189893
   HDAC complexes
    Sin3A-HDAC complex
     120189893
    BRAF-HDAC complex
     120189893
    REST complex
     120189893
    SHIP complex
     120189893
    MiDAC complex
     120189893
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120189893
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120189893
  Chromatin remodeling factors
   NuRD complex
    120189893
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 120189893
NCBI-ProteinID: XP_039048968
LinkDB
Position
Unknown
AA seq 473 aa
MEDSAAGASLPSGPDGKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRR
MEINRPFPAGPADIRRFHTEEYVDFLNAVSPDSMSDPTYSRHLKRFNVGEDCPVFDGLFG
FCQASAGGSLGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKFHR
RVLYVDIDFHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGVGNGKHYALNVPL
NDGMDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDVG
NMENLNAPRDMEKIRNMHLEQLSRLSHAPSVPFQTTPSTVQPPEEAEEDMDERPKPRIWN
GDDYESEPEDDEKPLRRFSNSDVKQPTTDADMRDVSQDLKEVKAEVKAEQSQS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggaagactccgccgccggcgcctcactaccttcgggacccgacgggaagaagcgccgt
gtgacatacttctacgagccaacgattggcgactactattacggccagggtcacccgatg
aaaccccaccggatccgtatggcccacaacctaatcgtccattattctctccaccgtcgg
atggagattaaccgtcctttccccgctggtcccgccgatatccgtcgcttccacaccgag
gagtacgtcgacttcctcaacgccgtcagccccgactccatgtccgatcccacttactct
cgccatttgaagcgttttaatgttggagaggattgccccgtgttcgatgggctttttggt
ttctgccaggcctccgccggtggctcccttggtgctgctgttaagttgaatagaggggat
gccgacatcgccatcaattgggctggtggattgcatcatgctaagaaaagtgaggcttct
gggttttgctacgttaatgatatcgttcttgggattcttgagctcctcaagtttcacagg
cgtgtactgtatgtagatattgatttccatcatggtgatggtgtagaagaggcattttac
accactgacagagttatgactgtttctttccataaatttggggatttcttcccagggact
ggacacataagagatgtcggggtgggtaatggaaaacactatgctttgaatgttcccttg
aatgatgggatggatgatgagagttttcggggtctgtttcgtcctataatccaaaaggtc
atggaagtgtatcaaccagatgcagttgttctccaatgtggagcagattcattgtccggt
gacaggttgggttgcttcaacttgtctgtgaagggccatgcagattgtctacgctttctt
agatctttcaatgttcctctaatggtcttgggtgggggagggtatactatccgcaatgtt
gctcgttgttggtgctatgagacagctgttgcagttggggtggagcctgataataagctg
ccttataatgaatattacgagtattttggtccagattatacacttcatgttgatgtgggc
aacatggagaaccttaatgcacctagagatatggagaagataaggaacatgcatttagag
cagctttctagactatcgcatgcacccagtgtaccttttcaaacaacaccttccaccgtc
caaccacctgaggaggcggaggaggacatggatgaaagaccaaaacctcggatatggaat
ggtgatgattatgagtcagagcctgaagatgatgagaaacctcttcgcagattctcgaat
tctgatgtgaaacaacctacaacagatgctgatatgagggatgtatcacaagatttgaaa
gaagtaaaagcagaagtgaaagcagaacagtcacaatcttga

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