Hibiscus syriacus (Rose-of-Sharon): 120190494
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Entry
120190494 CDS
T09559
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120190494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120190494
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120190494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_16
Motif
Other DBs
NCBI-GeneID:
120190494
NCBI-ProteinID:
XP_039049502
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MEPPLPVLPTNYEISNEFSSKGCKRTKLSSDSKDYDSTFSAANLQDDDEKKKPKGSADVI
DYSDPFAYAKMLETFDAGGKYGSVTKDFEALITRNTQLVSKLLALHPCLSSMVVNVEKTP
RKEASKVPSRQLSHLSQNNFIDLEDDSVGNDTTSSPVVILDSDDEDNRHPRPLHPVQEIV
LRKPSGNLIYKEIMVGEPNLFQVGESMGNRTYRKEKISLTSEIDVKKDKGVYVGVEDDVD
TQTEAEDDGLGDIWQEMSMALEFSKDAFEDPSCERMSEDDEDCDHSFVLKDDLGYVCRIC
GVIERGIETIIDIQYNKAKKSTHNYALEPRNGKNRESIETGVKFSEDDLAVTDITAHPRH
MKQMKPHQVEGFNFLLSNLVAENPGGCILAHAPGSGKTFMIISFMQSFLAKYPHAKPLVV
LPKGILATWKKEFETWQVEDIPLLDFYTGKADNRYQQLEVLKKWVECKSILFLGYKQFST
IICEGGTNQISKSCQEILLRAPSILILDEGHTPRNENTDVLQSLAKVQTVRKVVLSGTLY
QNHVKEVFNILNLVRPKFLRLDTSKSVIKRIMSKVHIAGVKKQLKAGADAAFYDLVEHTL
QKDENFERKVSVIHDLREMTSKVLHYYKGDFLDELPGLVDFTIVLSLSPRQKDEVHKLTR
SQKRKFKISSVGSAVYLHPKLNSFSENSEMTDDKMDDLLDKLDIKEGVKAKFFLNMLNLC
ESAGEKLLVFSQYLIPLKFLERLSVKMKGWQPGIQVFSITGESSSDHREWSMDRFNNSPD
AKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVYAYRLIAGD
SPEEEDHSTCFKKELIAKMWFEWNKYCGNRVFDMETVDLNECNDLFLESPLLREDIRDLY
RR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcccctgccggttttgccaacaaattacgaaatctcaaacgaattcagttct
aaaggttgtaaacggacaaaattatctagtgattcaaaagattatgacagcaccttctct
gctgcaaatcttcaagatgacgatgaaaagaagaaacctaagggctcagcagatgttatt
gattatagcgatccatttgcatatgctaaaatgcttgaaacttttgatgctggtggtaaa
tatggaagtgttacaaaggatttcgaagctcttattactagaaatacacaattagtaagc
aagctacttgctttgcatccttgtctttcaagtatggtggtgaatgtggaaaaaaccccg
aggaaagaggcttcaaaggtgccaagccgacaactttcgcatttgtcacagaataatttt
atcgacttggaggatgactctgttggaaatgacaccacatcatcaccagtagtgattttg
gattcagatgatgaagacaatagacatccgaggcctctacatcccgttcaggaaattgta
ttgaggaagccatccgggaatttaatatataaggagataatggttggagagcctaacttg
tttcaggttggggagtctatgggaaaccgaacttataggaaagaaaagattagcctaacc
agtgaaattgatgtcaagaaggataaaggtgtttatgttggtgttgaagatgatgttgat
actcaaaccgaggctgaagatgatggtttgggagatatttggcaggagatgtcaatggca
ttagagttctcgaaggatgcatttgaggacccttcctgtgaacgcatgtcagaagatgat
gaagactgtgatcattcttttgtcttgaaggatgatcttggttatgtgtgcagaatttgt
ggggttatcgagagaggaattgagactataattgacatccaatataacaaggccaaaaag
agtactcataattatgcattagagccacgaaatggcaaaaatagagagtcaattgaaaca
ggagttaaattttctgaagatgatttagcagtaaccgacataactgctcatccaaggcat
atgaagcaaatgaaacctcatcaagtagaaggctttaattttcttctgagcaatttggtg
gcagaaaaccctgggggatgcatcttggcccatgctcctggatctggaaaaacattcatg
ataatcagcttcatgcaaagtttcctagccaaatatccacatgctaaaccactagttgta
cttccaaaaggcatcttggctacatggaaaaaagagtttgagacatggcaagtagaggat
attccactgcttgatttttatactgggaaagcagataatagatatcagcaattggaggtt
ttgaagaagtgggttgaatgcaagagtatcctttttctgggatacaagcagttctctacc
ataatttgtgaaggtggaaccaatcaaatttctaaatcatgccaagagatactgctcaga
gcaccttcaattttaattttggatgaaggccacacaccaaggaatgagaacacagatgtg
ttgcaatcccttgcaaaagtgcaaacagttcgaaaagtagtactttcagggacactttat
caaaatcatgtcaaagaggtatttaacatattgaaccttgttcgaccaaagtttcttagg
ttggatacttcaaaatcagtaattaagcggataatgagcaaggtgcatatagctggagtg
aagaagcagttaaaagctggagctgatgcagctttttatgatttggtggagcacacactg
cagaaagatgaaaattttgagaggaaagtctctgtcatccatgatctacgggagatgacc
agcaaagtccttcattactataaaggtgatttcttggatgagcttcctggacttgttgat
ttcaccattgtgctcagtcttagtcctagacagaaggatgaagtccataagttaactagg
tctcaaaaaaggaagttcaagatttcatctgttggcagtgctgtttaccttcatccaaaa
ctaaattctttctccgagaattctgagatgacagatgataagatggatgacttgttagac
aaactagatatcaaagagggagtcaaagcaaaattttttctgaacatgttaaatttatgt
gaatcagctggtgagaaactccttgttttcagtcagtatctgattcccttgaaattttta
gagagattgtctgtgaaaatgaagggttggcaaccaggaattcaggttttctcaatcacg
ggtgaatcgagttctgatcatcgggagtggtctatggatcgcttcaacaactctcctgat
gccaaagttttctttggatctattaaggcatgcggagagggaatttctttggtgggggca
tcccgaattatcatcttggatgtccatcttaatccatctgtgacccgccaagcaataggt
cgtgcatttcgccctggccaaaagaagaaagtgtatgcgtatagattgattgcgggggat
tcccctgaagaggaggatcatagtacttgtttcaagaaggaattaattgcaaaaatgtgg
tttgagtggaacaagtattgtggtaaccgagtttttgatatggagactgttgatttgaat
gagtgcaatgatctctttctggaaagtcctttgttaagggaagatatcagggatctgtac
agaaggtga
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