Hibiscus syriacus (Rose-of-Sharon): 120190839
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Entry
120190839 CDS
T09559
Name
(RefSeq) rhamnogalacturonate lyase B-like isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120190839
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120190839
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
120190839
NCBI-ProteinID:
XP_039049805
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MTSTVGRIINCFSDCGGCKSRTGNARQDTLNMNQDTNCAPMLTQEVRLHNQDCYVVMDNG
IVQVTLSKPGGIVTGIRYNGIDNLLEVRNRETNRGYWDLHWNEIGGKGIFDVIQGTSFRV
IVENEEQVELSFTRTWNPSLEGKYIPLNIDKRFIMLRGSSGFYSYAIYEHLKEWPGFELG
ETRITFKLRKDKFQYMAIADNRKRYMPFPDDRSNGRGVPLAYPEAVLLVNPMDQRLTGEV
DDKYQYSCENKDLRVHGWICFDPPVGFWQITPSDEFRSGGPLKQNLSSHVGPTTLAMFLS
AHYAGKYMVPRFEAGEPWKKVFGPVFMYFNSAAYGNDPLWLWEDAKIKMMVEIQSWPYSF
PASEDFPKSDQRGNVNGRILVQDRYISNENVIAGGAYIGLAPPGNAGSWQMESKNYQFWT
RANENGFFSIRNIRPGDYTVYAWVPGFIGDFRHEAVITISSGCNIEMGDVLYEPPRDGPT
LWEIGIPDRSAAEFYVPDPDPKYINRLFLNHPDRFRQYGLWDRYTELYPDGDLVYKIGVS
DYRKDWFFAQVVRKIGNNAYQGTTWQIKFDVDNVDRNDIYKLRVALASATLAELQIRVND
PNSNRPLFTTGLIGRDNAIARHGIHGIYMLYNVDIPGTRLVKGENTIFLKQPRCNGPFQG
FMYDYIRLEGPPTTC
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcactgtggggaggatcataaattgtttcagtgactgtggtggctgtaaaagt
cgtactggaaatgcaagacaagatacgttgaacatgaatcaggatacaaattgtgctcca
atgcttacacaggaagtccgattgcataatcaagactgctatgtggtgatggataatggc
atagttcaagtcacattatcaaaaccagggggcattgttaccggaatacggtataatggg
attgacaacttgcttgaagttcgaaacagggaaactaatagagggtattgggacctgcac
tggaatgaaataggaggcaagggaatatttgatgtaatccaaggaacaagttttcgagtt
atagtggaaaatgaggaacaagttgagctctcgttcacaagaacttggaacccctcccta
gagggcaagtacattcccctaaatattgataaaaggtttataatgctacgtggttcatca
ggcttttactcctatgccatctacgagcatctcaaggaatggcctggttttgagcttggt
gaaaccagaattactttcaagctcagaaaagacaagtttcaatacatggccatagcagat
aacaggaaaagatacatgcccttccctgatgaccgatcaaatggaagaggtgtacctttg
gcttatccagaagcagtcctacttgtcaatcccatggatcagaggctaacaggagaggtg
gatgacaagtatcagtattcatgtgagaacaaagatcttcgggttcatggttggatctgc
tttgacccacctgttgggttctggcaaatcacacctagtgacgagttcagatctggtggg
cccctaaaacagaacctaagctcacatgtaggacccaccactctggctatgtttcttagt
gcacattatgcaggtaaatatatggttccacgatttgaagctggggaaccatggaagaaa
gtttttggccctgtttttatgtattttaattccgcagcctatggaaatgatccactttgg
ctgtgggaggatgctaaaatcaagatgatggttgaaatccaaagctggccatacagtttc
cctgcttcggaggatttcccgaagtcagatcaacggggtaatgttaatggcagaatatta
gtccaagacaggtatatcagcaatgagaacgtaatagctggtggtgcatatataggcttg
gctcctcccggaaatgcaggttcgtggcaaatggaaagcaagaactaccaattctggacc
cgagcaaatgagaatggctttttctccattagaaatattcgccctggtgactacactgtc
tatgcatgggtccctgggtttattggagatttccgacacgaagctgtcattaccataagc
tcaggttgtaacattgaaatgggtgatgttctatatgaacccccaagagatggaccaaca
ttgtgggaaataggcatccctgatcggtcagctgcggagttctatgttcctgatcccgat
ccaaagtatatcaataggctttttctcaaccatcctgacaggtttaggcaatacgggttg
tgggacagatacacagaactatatcctgatggagacttggtttacaaaattggtgttagt
gattacaggaaagattggttttttgcacaggttgtcaggaagataggaaataatgcatat
caaggaactacatggcaaatcaaatttgacgtcgataatgtggatcggaatgatatctac
aaattgcgagtggcacttgcatcggccactctagctgaattgcagattcgggttaatgat
ccaaattcaaatcgtcctctctttacgactggactgatagggagggacaacgcaatagcg
agacacggaattcatgggatctacatgctgtacaatgtggacatacctggtactagactt
gttaaaggggaaaataccatctttctgaaacaaccaagatgcaacggtcctttccaagga
ttcatgtatgattacatccgtttagaaggtcctcctactacatgttaa
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