Hibiscus syriacus (Rose-of-Sharon): 120190840
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Entry
120190840 CDS
T09559
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120190840
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120190840
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
120190840
NCBI-ProteinID:
XP_039049808
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All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSSPGVQLHIQDHYVVLDNGILQVTISNPDGIVTGIQYNGTDNLLEVEDEEVNRGFWDLV
WSKTGSTGTTGTFDVFKGTSFKVVVENEDQVEVSFTRTWDFSLEGSVVPLNLDKRFIMLR
NSSGFYSYAIFEHLEEWPPFNLPQVRIVFKLRKDKFHYMAVADNRQRFMPLPDDRLPDRG
QPLATPEAVLLVNPVEPEFRGEVDDKYQYSSENKDLKVHGWISMNPPVGFWQITPSSEFR
SGGPVKQNLTSHVGPYCLAMFLSAHYAGEDLVLKLNPGEPWKKVFGPVFLYLNSVSSEDN
CFSLWEDAKNQMQRETQNWPYSFPASEDFPKSDQRGKVCGRLKVQDRYVRYESIPANGAY
IGLAPTGDVGSWQRECKGYQFWTRADDDGNFIINNIRTGAYNVFAWVPGFIGDYRYDVVV
NITEGCSIDVGDLIYEPPRDGPTLWEIGIPDRSVAEFYIPEPDPKYINKLYVNHPDRYRQ
YGLWERYDDLYPDGDLVFTIGVSQYKNDWFFAQVNRKKKDGTYQATTWQIKFTLQDVDHT
GTYKLRLALATAHLAELQVRVNDPKSDPPLFTTGPIGHDNTIARHGIHGLYRLYNIDVGG
VELVEGENIIFLTQAINTDSLQGIMYDYIRLECPSSSST
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccaggggtgcaactgcatattcaagatcattatgtggtgttggataatgga
atcttacaagtgacaatatcaaatcctgacgggattgtcactggaatacaatataatggc
accgacaacttgcttgaagtcgaggatgaggaagttaatagagggttttgggatctagtt
tggagtaaaacaggaagtacagggacaacaggaacattcgacgtgtttaaaggaacaagt
tttaaggttgtagtagaaaatgaggatcaagtggaggtttcgttcacaagaacgtgggat
ttctctctggagggtagtgttgttcccttgaatttagacaaaaggttcataatgcttcga
aattcgtcgggattctactcctatgccatctttgaacacttagaggaatggcctccattc
aatcttccacaagtcagaattgtattcaagctcagaaaagacaaatttcattacatggcc
gtagcagacaacaggcaaagattcatgcctctgccagatgaccggttaccagaccgaggc
caacctctggcaaccccggaagccgtactgcttgtcaatcctgtggagccggagttcaga
ggagaggttgatgacaagtatcaatattcatccgagaacaaagatctaaaagtccatggg
tggatatccatgaaccccccagttggtttctggcaaattactcccagcagtgaattcagg
tctggtggacccgtcaaacagaatctgacatcccatgtcggcccttattgtcttgcaatg
tttcttagtgctcactatgctggagaggatttggtgctgaagctcaacccgggggagcca
tggaaaaaggttttcggaccggttttcttgtatctgaattctgtatcaagtgaagacaat
tgtttttccctttgggaagatgctaaaaaccagatgcagagggagacccagaactggccc
tacagttttccagcatcagaggattttccgaaatcggatcaacggggtaaagtatgcggc
aggctaaaagttcaagacaggtatgtcagatatgaatccatcccagcaaatggtgcttat
ataggcttggcaccaacaggcgatgtcggatcgtggcaaagagaatgcaagggttatcaa
ttctggaccagagcagatgatgatggcaacttcataatcaataatataaggactggtgca
tataatgtttttgcatgggtccctggtttcattggagattacagatatgatgttgtggtt
aacattacagaaggttgttccattgatgtgggtgatctgatatacgagcctccaagagat
ggccctacattgtgggaaatcggcatcccagatcgttcggtggccgagttttacattccg
gaacccgaccctaagtacattaataaactttatgtcaaccatcctgacaggtatagacaa
tatgggttgtgggaaagatacgatgatctttatcctgatggggacttggttttcacaatt
ggcgttagtcaatacaaaaatgactggttctttgcacaagttaacaggaagaaaaaagat
ggtacttatcaagcaactacatggcaaatcaagttcacgctccaagatgttgatcatact
ggaacttacaaattgagactggccctagcaactgcacatctagctgaattgcaggttcgg
gtcaatgatccaaaatcagaccctcctctgttcaccactggaccaatcgggcatgataac
acaattgcaaggcatggaattcatgggctgtaccgactttataacatagacgtgggtggc
gttgagcttgtggaaggggagaatatcatttttttgacacaagcaataaacactgattcc
cttcaggggatcatgtatgactatataaggcttgaatgtccctcttctagttccacctga
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