Hibiscus syriacus (Rose-of-Sharon): 120191645
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Entry
120191645 CDS
T09559
Name
(RefSeq) probable pectate lyase 1 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120191645
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120191645
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120191645
NCBI-ProteinID:
XP_039050482
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Position
Unknown
AA seq
447 aa
AA seq
DB search
MAVANKWAYASLALLFLLLIGAMAVVQIGNASSNVETEKVRSSKNSTMAARSEEVEPLNQ
NAVPDPEAVAAEIESIIDLSIRNVTERRELGFFTCGTGNPIDDCWRCDANWQKNRKRLAD
CGIGFGRNAIGGRDGRFYVVTDPNDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIRLKQ
ELIVNSFKTIDGRGANVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHFGW
RTMADGDAISIFSSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHS
DSYTRDKQMQVTIAYNHFGKGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
GNRYAAPTNPFAKEVTKRVETPANQWKSWNWRSEGDLLLNGAYFTPSGAGASASYARASS
LGAKSSSMVGAMTSNAGALPCRRGRQC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcaaacaagtgggcttacgcttctttagctcttctgtttttgcttcttatc
ggagcaatggccgttgtacagatcggcaacgcttccagcaatgtggagacggagaaggtg
cggagctcgaagaactcaacaatggcagctaggtcagaagaggttgagccactgaaccag
aatgcggttcctgacccagaggcagtagcagccgagatcgaatccatcattgacctgagt
attcgcaatgtgactgaaaggagggagttggggttcttcacgtgtggaaccggtaacccc
atcgacgattgctggcgttgtgatgcaaattggcagaagaaccggaagagacttgctgat
tgtggcattggttttggaaggaatgcaattggtgggcgtgatggacgtttctatgttgtc
accgaccctaatgatgatgaccctgttaaccccagacccggtaccttgcgtcatgctgtg
atccaggacgagcctctttggattgtgttcaagagggacatggttattcggttgaaacag
gagctgatagtgaacagttttaagacgatcgatggtcgtggggccaatgtacatattgct
aatggggcatgtatcaccatccagtttgttaccaatgtcattattcacggtcttcacatt
catgattgtaagcctactggcaatgccatggtgagaagctcaccatctcactttgggtgg
aggacgatggctgacggcgatgccatctccattttcagttcgagccacatttgggttgat
cacaattctctctctaattgtgccgacggtcttgttgatgctgtcatgggctcaactgcc
attaccatatccaacaaccacatgacccaccacaatgaggtgatgttgctaggccacagt
gactcatacacaagggacaagcagatgcaagtcaccattgcctacaaccatttcggaaag
ggtcttatccagaggatgccaaggtgtaggcatggatattttcatgtggtgaacaacgac
tacacgcactgggaaatgtatgccattggtggaagtgcgaacccaaccatcaacagccag
ggtaacagatatgcagctccaaccaacccatttgcaaaggaggttaccaagagagtggag
acacctgcaaatcaatggaagagctggaactggaggtcagaaggagacttgttgctgaat
ggtgcttacttcactccgtctggggctggagcctcagccagctatgctagagcgtcgagc
ttgggagccaagtcctcttccatggttggggccatgacttccaatgccggtgctcttccc
tgccgccgaggcaggcagtgttag
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