Hibiscus syriacus (Rose-of-Sharon): 120191696
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Entry
120191696 CDS
T09559
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120191696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120191696
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120191696
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120191696
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120191696
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120191696
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120191696
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120191696
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120191696
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120191696
Exosomal proteins of other body fluids (saliva and urine)
120191696
Exosomal proteins of breast cancer cells
120191696
Exosomal proteins of colorectal cancer cells
120191696
Exosomal proteins of bladder cancer cells
120191696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
120191696
NCBI-ProteinID:
XP_039050541
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MYRFASSLASKARVARKTTHQIGSRLSWNRNYAAKDIKFGVEARALMLKGVEELADAVRV
TMGPKGRNVVIEQSYGSPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCAAVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDTVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNTK
NQKCELDDPLILIHEKKISSLNAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKASLHDLAVLTGGEVITEELGMNIEKVDLDMLGTCKKVTVSKDD
TVILDGNGDKKSIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVELPKDEKDAPTMPGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcttcaagcctcgcttccaaagctagggttgctaggaaaactacacat
cagattggtagtagactgagttggaataggaactatgcagcaaaagatattaaatttggg
gttgaagctcgagctttgatgcttaaaggtgtcgaagagcttgctgatgctgttagagta
accatgggtcctaagggacggaatgtggttattgaacaaagctatggttcccccaaagta
actaaagatggtgtaactgttgcaaagagcattgaattcaaagacaaagtcaagaacgtt
ggtgcgagtcttgtgaaacaagttgcaaatgccactaacgatgtagcgggtgatgggact
acctgtgcggccgtgcttacacgagcaatattcacagaaggatgcaagtcagttgctgca
ggaatgaatgcaatggacctgaggcgtggcataacaatggcagttgacactgttgtgaca
aacttgaaaagccgagcacggatgattagcacatctgaagagatagcccaggttggaaca
atatctgctaatggagagagggaaattggcgaattaattgcaaaggccatggagaaggtt
ggcaaagaaggggtgataacaattcaggatggaaaaacgttatttaatgagttggaagtt
gttgagggcatgaagctggacaggggctacatatctccatatttcatcaccaatacgaaa
aaccaaaaatgtgaattagatgatcctcttatcctaattcacgagaagaaaatatcaagc
ttgaatgctgttgtgaaagtactagagttggctttaaagaggcaaaggcccttgttgatc
gttgctgaagatgtagagagtgaagcacttgctacactcattcttaataagcttcgtgct
ggaatcaaggtctgtgccatcaaagccccaggttttggagaaaacaggaaggctagtctg
catgatcttgctgtcctcacaggaggggaggttataactgaagaacttggcatgaacatt
gaaaaggtggatctggacatgcttggaacttgcaaaaaggttacggtctcaaaggatgac
actgttattcttgatgggaatggtgacaagaaatccattgaagaaagatgtgaacagatt
aggtcagcaattgaattgagcacctctgattatgataaagagaagttgcaagagagattg
gcaaagctttctggtggtgtagctgtcttgaagatcggaggagctagtgaagctgaagtt
agcgagaagaaggatagagttacagatgcattaaacgctacaaaggcagctgtagaagag
ggtattgtgccaggtggtggtgtcgctcttttgtatgcatcgaaagagttggacaagcta
cctacggccaactttgaccagaagatcggtgttcaaattatccagaatgctctaaagaca
cctgtgcacacaattgcttcaaacgctggagtcgagggagccgttattgtcggtaaactg
ttagagcaggataaccctgatctcgggtatgatgcagctaagggtgaatatgtcgatatg
gtgaaggcgggaatcattgatccattgaaagtaataagaactgctttggttgatgctgca
agtgtgtcctcattgatgacaacaaccgaagccattgtagtcgaacttcccaaggatgag
aaggatgctccgacaatgcccggcggtatggggggcatggattattga
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