Hibiscus syriacus (Rose-of-Sharon): 120191710
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Entry
120191710 CDS
T09559
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120191710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120191710
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120191710
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120191710
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120191710
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120191710
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120191710
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120191710
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120191710
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120191710
Exosomal proteins of other body fluids (saliva and urine)
120191710
Exosomal proteins of breast cancer cells
120191710
Exosomal proteins of colorectal cancer cells
120191710
Exosomal proteins of bladder cancer cells
120191710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
120191710
NCBI-ProteinID:
XP_039050558
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MYRFASSLASKTRVARKTTHQIGSRLSWNRNYAAKDIKFGVEARALMLKGVEELADAVRV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDTVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDKGYISPYFITNTK
NQKCELDDPLILIHEKKISSLNAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKASLYDLAVLTGGEVITEELGMNLEKVDLDMLGTCKKVTVSKDD
TVILDGNGDKKSIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKDLDKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAIIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVELPKDEKDVPAMPGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcttcaagcctcgcttccaaaactagggttgctaggaaaactacacat
cagattggtagtagactgagttggaataggaattatgctgcaaaagatattaaatttggg
gttgaagctcgagctttgatgcttaaaggtgtcgaagagcttgctgatgctgttagagta
accatgggtcctaaggggcgtaatgtggttattgaacaaagctatggtgcccccaaagtg
actaaagatggtgtaactgttgcaaagagcattgaattcaaagacaaagtcaagaacgtt
ggtgcgagtcttgtgaaacaagttgcaaatgccaccaatgatgtagcgggtgatgggact
acctgtgcgaccgtgcttacacgagcaatattcacagaaggatgcaagtcagttgctgca
ggaatgaatgcgatggacctgaggcgtggcataacaatggctgttgacactgttgtgaca
aacttgaaaagccgggcacggatgattagcacatctgaagagatagcccaggttggaaca
atatcggctaatggagagagggaaattggcgaattaattgcaaaggccatggagaaggtt
ggcaaagaaggggtgataacaattcaggatggaaaaacgttatttaatgagttggaagtt
gttgagggcatgaagctggacaagggctacatatctccatatttcatcaccaatacgaaa
aaccaaaaatgtgaattagatgatcctcttatcctaattcacgagaagaaaatatcgagc
ttgaatgctgttgtgaaagtactagagttagctttaaagaggcaaaggcccttgctcatc
gtagctgaagatgtagagagtgaagcacttgctacgctcattcttaacaagcttcgtgct
ggaatcaaggtctgtgccatcaaagcccctggttttggagaaaacaggaaggctagtctg
tatgatcttgctgtcctcacaggaggagaggttataaccgaagaacttggcatgaacctt
gaaaaggtggatctggacatgcttggaacttgcaaaaaggttacggtctcaaaggatgac
actgttattcttgacgggaatggtgacaagaaatccattgaagaaagatgtgaacagatt
aggtcagcaattgaattgagcacctctgattatgataaagagaagttgcaagagagattg
gcaaagctttctggtggtgtagctgtcttgaagatcggaggagctagtgaagctgaagtt
agcgagaagaaggatagagttacggatgcattaaacgctacaaaggcagctgtagaagag
ggtattgtgccaggtggtggtgtcgctcttttgtatgcatcgaaagatttggacaagcta
cctacggccaattttgaccagaagatcggtgttcaaattatccagaatgctctaaagaca
cctgtgcacacaattgcttcaaatgctggagtcgagggagccattattgtcggtaaactg
ttagagcaggataaccctgatctcgggtatgatgcagccaaaggtgaatatgtcgacatg
gtgaaggctggtattattgatccattgaaagtaataagaactgctttggtcgatgctgca
agtgtgtcctcattgatgacaacaaccgaagccattgtagtcgaacttcccaaggatgag
aaggatgttccggcaatgcccggcggtatggggggcatggattattga
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