Hibiscus syriacus (Rose-of-Sharon): 120192582
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Entry
120192582 CDS
T09559
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like isoform X1
KO
K07466
replication factor A1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03030
DNA replication
hsyr03420
Nucleotide excision repair
hsyr03430
Mismatch repair
hsyr03440
Homologous recombination
hsyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120192582
03420 Nucleotide excision repair
120192582
03430 Mismatch repair
120192582
03440 Homologous recombination
120192582
03460 Fanconi anemia pathway
120192582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120192582
03032 DNA replication proteins [BR:
hsyr03032
]
120192582
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120192582
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120192582
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120192582
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120192582
MMR (mismatch excision repair)
120192582
DSBR (double strand breaks repair)
HR (homologous recombination)
120192582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
zf-CCHC
RADX
DUF936
BRCA-2_OB1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
120192582
NCBI-ProteinID:
XP_039051268
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MEVNLTGEAVTRIINGEVSASSDLKPVLQVIELEEIQTTSQQQQQQQEPRNSERGFVLLL
SDGVLTQQCLLAASKKRLVKSSKLQIGSIVRLTQFVSNFVQDRMVVIIIELEVMVGQCDI
IGKPVPAQKSTSFAQAHTGFHSPGPVVSHPLIQSVPVYQQPSPFYINREPPAKNEIGRII
PISVLNPYQGSWTIKARVTKKQELKHYRNAHGEGKVFSFNLIDLDGGEIRATCFNAVVDQ
FYNQIQAGNIYLISRGSLKPAQKEFNHLNSDYQIFLDSRSIVQLCSEDNTIPWQKFHFRA
ISDVEDMKNNDVVDIIGVVFSVGPTALLMRKNDSEILKRSLHLKDMSGRSVELTLWGAFC
NSEGEKLQTLCDSGEFPILAVKSGRVSDFSGKEVGTISSTQLFINPDFPEARKLREWFAG
EGRNTSSVSIAREKSSLTRTFNRKTISQIKDERLGTSEKPDWITVVATVVYIKLDDFCYT
ACPLMDGDLQCNKKVTDNGDGKWRCNKCDRLVDECDYRYVLQFLIQDHTDITWVIAFQES
GEGLMGVSAKDLYRLRYENQNVEKFKEIMHQIMFNKYTFKLKVKEETFNDKRRLKLMVVE
VENKKNSSESRYLLSLIYKIKASNSCLFASKAATTTLNLGMDYCGIGTDGLSILGGHRPR
EIVSNLNLFCNSCNVVGHNSTNCSTLINGPEQSMGRDYTDRISSKESVWRTSDECYKCHQ
FGHWAKNCPRAGQSYRSSGFLSMRYGGVSR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatttaacgggagaggctgtgactcggattataaacggagaggtgtctgct
tcgagtgatttgaaaccggtgcttcaagtgatagagctagaagagattcaaacgacgtcg
caacaacaacagcagcagcaagaaccgagaaacagcgagagggggttcgtgctattgcta
tccgacggggtgttgacgcagcaatgtctgcttgctgccagtaagaaacgactcgtgaag
tcctcaaagttgcaaattggctccattgttcggttgactcagttcgttagcaactttgtt
caagatcgcatggtggttattattattgagttggaggtgatggttggacaatgtgatatc
attgggaagcctgtaccagcacaaaaatctactagtttcgcacaagctcatactggtttc
catagccctggtccagtagtttctcatcctctaatccagtcagtacctgtctatcaacag
ccatccccattctacattaacagagagccaccagccaagaatgagataggacgaataatc
ccgatttctgttctgaatccgtatcaggggagttggacaataaaggccagagtaacaaaa
aaacaagaacttaagcactatagaaatgctcatggcgaagggaaagttttctctttcaat
cttattgatttggatggtggggaaatacgagcaacttgctttaatgctgtggttgaccaa
ttctataaccagattcaagctggaaatatttatttgatatctagaggaagtttaaaacct
gctcagaaggaattcaatcaccttaatagtgattatcaaattttccttgatagcagatca
atagtacagttgtgttctgaggacaatacaattccttggcagaagtttcatttccgtgcc
ataagcgatgttgaagatatgaagaacaatgatgttgtggatataatcggtgtggtattt
tctgttggtcctactgctttgttaatgagaaaaaatgattcagaaattttgaagagatcc
cttcatttgaaggacatgtctggccggagcgttgaattaactttatggggagctttttgc
aacagtgaaggagaaaagctccaaactttgtgcgactctggagagtttccgattctggct
gtgaaatctggtagggtgagtgattttagtgggaaggaagtaggaactatttcttctacg
cagttgtttataaatccagattttcctgaggcccggaagctaagggaatggtttgccggt
gaagggaggaacactagttctgtctccattgctagggaaaaatcaagtttgactaggaca
tttaatcgaaaaactatctcacaaatcaaagatgaaagattaggaacttctgaaaagcca
gattggattacagttgtagccacggttgtttacatcaagttagatgatttctgctataca
gcttgtcctctcatggatggggatctccaatgcaacaaaaaggttactgataatggagat
gggaaatggcggtgcaataaatgtgataggttagtagatgaatgtgactacagatatgta
cttcagttcctgattcaagatcatacagacataacatgggtgatagcatttcaggaatct
ggtgagggtctaatgggggtgtctgcaaaagatttgtatcgcttgaggtatgaaaaccaa
aatgtggaaaaatttaaagaaatcatgcatcagattatgtttaataaatatactttcaag
ttgaaagtaaaggaagaaacttttaatgataaacggcgtctgaaattgatggtggtggaa
gtagaaaataaaaaaaattcatcagaatccagatacctgttgtctttgatttataagatt
aaagcaagcaattcttgtctatttgcatcgaaggcagcaactaccacactaaatcttgga
atggattattgtggaataggaactgatggtctgtctattcttggaggtcataggcctaga
gaaattgtctcaaatctaaatttgttctgtaatagttgcaatgttgttggtcataactct
acgaattgctccaccttaattaatggtccagaacagtctatgggcagggattacactgat
agaatatcttccaaggaaagtgtttggcgtacctcagatgagtgctataaatgtcatcaa
tttggacattgggccaaaaactgtccaagggccggtcagtcttatcgaagctctggtttt
ttgtctatgcgatatggaggtgtttcaaggtaa
DBGET
integrated database retrieval system
