Hibiscus syriacus (Rose-of-Sharon): 120192913
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Entry
120192913 CDS
T09559
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120192913
Enzymes [BR:
hsyr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
120192913
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
120192913
Prokaryotic type
Methylthiotransferases
120192913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
DUF6447
Motif
Other DBs
NCBI-GeneID:
120192913
NCBI-ProteinID:
XP_039051527
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MEDIEDLLVGSGGAPPGFRLPLNAVGVNPRKKNKAKPSKISPLNDPLKIPGTQTIYVKTF
GCSHNQSDSEYMAGQLSSFGYAISDNPEEGDLWLINTCTVKNPSQSAMNTLITKGKSAKK
PLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPK
VRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVKTVIADGVKEIWLSSE
DTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAAVLRHPCVYS
FLHVPVQSGSDSVLTAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFAQ
TVNLIKEYKLPQVHISQFYPRPGTPAARMKKVPSTIVKNRSRELTSVFEAFTPYNGMEGR
VERIWITEIATDGIHLVGHTKGYVQVLIIAPESILGTSAMVKITSVGRWSVFGEVIETLT
LVNVKMAPENVNTQEKPLPCSNRYESCACSKEPEPCSCGPDFCGGQIRLEEYAVSKNDSL
MENRVGKNPIHWLIRKRRNHELEKVENDIDSGIKNKQDWTPGGWGIVDRALLVGIFVSFL
MIVAVIMHLEFRTLPSK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaggatttgttggtcggcagcggcggagctccgcctgggtttaggcta
cctttaaatgctgttggagtaaatccaaggaagaagaacaaagccaaacccagcaagatt
tctccattgaatgaccctctcaaaatccctggcactcagactatttatgtcaagactttt
gggtgctcacataaccagagtgacagtgaatatatggcgggtcagctttcatcatttggt
tatgcaatatctgacaaccctgaggaaggagacctttggctaataaatacatgcactgtg
aaaaacccaagtcagtcagcaatgaataccttaataacaaaaggtaaaagtgcaaaaaag
ccactggtggttgctgggtgtgtccctcaagggagtcgagatttgaaagagctcgaaggg
gtcagtatagttggagtccagcaaattgaccgtgttgttgaagttgtggaggagaccctg
aaagggcatgaggtgcggcttttgaaccgcaagactttgccagcgctggaccttcctaag
gttagaaagaacaagtttgttgagattcttccaattaatgttggttgtttaggtgcttgc
acttattgtaagacaaagcatgctcgtggtcacttggggagctacactgttgacagtctt
gttgagcgtgtcaaaactgttatagctgatggggtcaaggagatatggttgagtagtgaa
gatactggagcatatggtcgtgacattggggttaatctaccaattttgttgaatgccatt
gttgcggaacttcctcctgatgggagcacaatgctacgaattgggatgactaatcctcct
tttattttggagcatctgaaagagatagcagctgttttgcgtcatccttgtgtatattcc
tttcttcacgttccagttcaatctggcagtgattctgtcttgactgccatgaatcgggaa
tatactgtgagcgagtttaggaccgtggtagataccttgactgaactcgtgcctggcatg
cagattgcaactgatataatatgtggatttcctggtgaaactgatgaagattttgctcaa
acagtaaatcttatcaaggaatacaagctgccgcaagttcatatatcgcagttctatcct
agacctggaactcctgctgcaaggatgaagaaggtcccaagtactatagtgaagaatcgg
agccgtgaattaacttctgtttttgaagcctttacaccgtacaatggaatggaaggcaga
gttgaaagaatttggattactgaaattgcaactgatggtattcatttggttggccataca
aagggatatgtgcaggttctgataattgctcctgaaagtatattgggcacttcagctatg
gtgaagataacatccgtgggaagatggtcagtgtttggggaagtgattgagaccctcact
ctagtaaatgtgaaaatggctccggagaacgttaatactcaggagaaaccgctcccttgc
tccaaccggtatgagagttgtgcatgttctaaggagccagaaccatgctcttgtggacca
gacttctgtggtggacagattagattggaagaatatgcggtttccaagaatgatagtttg
atggaaaaccgagttggcaaaaatccgattcactggttaataaggaagcgaaggaaccat
gagcttgaaaaggtggagaatgatatcgactcggggataaagaacaagcaggattggacc
ccaggcggctggggtattgttgatagggctcttcttgttggaatctttgtcagctttttg
atgattgttgcagtaataatgcatctagaatttaggactttaccatcaaaatga
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