Hibiscus syriacus (Rose-of-Sharon): 120195002
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Entry
120195002 CDS
T09559
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03030
DNA replication
hsyr03410
Base excision repair
hsyr03420
Nucleotide excision repair
hsyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120195002
03410 Base excision repair
120195002
03420 Nucleotide excision repair
120195002
03430 Mismatch repair
120195002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsyr03032
]
120195002
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120195002
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120195002
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120195002
DNA Replication Termination Factors
ELG1-RFC complex
120195002
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120195002
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120195002
Check point factors
HRAD17(Rad24)-RFC complex
120195002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_lid_RFC1
AAA_16
ATPase_2
RuvB_N
AAA_11
DNAX_ATPase_lid
AAA_14
AAA_5
AAA_30
nSTAND_NTPase5
AAA_7
DUF815
bpMoxR
ResIII
AAA_19
AAA_24
nSTAND3
AAA_3
TniB
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
120195002
NCBI-ProteinID:
XP_039053078
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MAEVISLMDIDEDDKHQEQNGSQKLNKGKSVATATDAKATPWVEKYRPQSLADVAAHRDI
VDTIDRLTSENRLPHLLLYGPPGTGKTSTILVVARKLYGAQYHNIILELNASDDRGIDVV
RQQIQGFASTQSFSFGVKSSVKLILLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
NKIIPALQSRCTRFRFAPLDPIHVTERLKHVIDAEGLDVTDSGLAALVRLSNGDMRKALN
ILQSSIINNFFATCSQHMASQKITDEAVYLCTGNPLPKDIEQISYWLLNESFAESLTRVS
ETKTRRGLALIDIVREVTMFVFKIKMPSDFRVQLVNNLADIEYSLSFGCNDKLQLGSLIA
TFTQARSALVAAAK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtaatttcgcttatggatatcgacgaagatgacaagcaccaggaacaaaac
ggctctcagaagctaaacaagggcaaaagcgtcgccacagccacagatgccaaagccact
ccctgggtcgagaagtaccgtcctcagtccctcgccgacgtagctgctcaccgcgatatt
gttgacaccattgataggcttactagcgagaacagattgccgcatcttctattgtatggt
cctcccggaacaggcaaaacatccaccattctggttgttgcacggaagctttatggagca
cagtatcataatattattctcgagttgaatgcttcggatgatagaggaattgatgtcgtt
aggcaacaaattcaaggttttgctagcacccaaagcttttcatttggggtgaagtcatcg
gtaaagttgattttacttgatgaggcagatgctatgacaaaggatgcccaatttgccttg
cgtagagttattgagaagtacacaaagaatactaggtttgcactgatctgtaatcatgtc
aacaagatcattcccgcactacagtccagatgtactcggttcagatttgcacctcttgat
cctattcatgtcactgaacgacttaagcacgttatcgatgctgaaggacttgatgtaact
gatagtggcttggcagcactagtacggcttagcaatggtgacatgagaaaggctttaaac
attttgcagagtagcattattaataatttctttgctacatgcagtcaacacatggcttct
cagaagattacagatgaagccgtgtatctctgtactggaaatccattgcctaaagacatt
gagcaaatatcttactggcttctgaatgaatcgtttgctgagagtctcacacgagtttct
gaaacgaagacaagaagaggattggccttgattgatattgtgagggaagtgactatgttt
gtttttaagattaaaatgccctcagattttcgagttcagttagttaacaacttggcagac
atagaatatagtttgagttttgggtgcaatgataaattacaactgggatcacttattgct
actttcactcaagctagatctgctctggttgctgcagcaaagtag
DBGET
integrated database retrieval system
