Hibiscus syriacus (Rose-of-Sharon): 120195517
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Entry
120195517 CDS
T09559
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120195517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120195517
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120195517
Complex B
120195517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
120195517
NCBI-ProteinID:
XP_039053453
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MANNSQPSSAQPHWPPAVGSMVPQSYGSPLSSQFRPVAPTQQGQHFVPAASQQFRPVGQV
PSPNAGMPAVQNLQMQFSQPMQQYQPRPNQPGLSTPLQQSVQVPYGQTNRPFTSELPHSH
QSAPPLNSHMPGVGAPGMPPSSSYGFAPSSFGLPQNVGTPSQFQPISQVHASVAPVSMQP
WLSTGNQSVSLATPIQQTSQQPPLSSADAVANVPNLTLQSSDWQEHTSVDGRRYYYNKKT
RQSSWEKPLELMTPIERADASTVWKEFTTTEGRKYYYNKVTKQSKWTIPEELKLAREQAQ
AAASQGTPSGSGVPQAPVAAAGSASEMPSTAISLSSNTLQDSSLVSVMPVVNSSSTSVSG
PTAVPVSQSATTDAPGAVSVSPLPAVPSGGSTVSVPSVSANTAVTRSLEPIATQDTDGAS
LQDIEEAKKGMTTAGKVNVTPVEEKLLDDEPLVYANKLEAKNAFKSLLESANVQSDWTWE
QAMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRLKKAREEFTKMLEDSTE
LTSSMRWSKAQSLFENDERFKAVERARDREDLFESYIVDLERKEREHAAEEKRRNIAEYR
KFLESCDFIKANSLWRKVQDRLEDDERCSRLEKIDRLLIFQDYIHDLEKEDEEKKKMQKE
QLRRAERKNRDAFRQLMEDHVADGTLTAKTYWRDYSLKVKDLPQYLAVASNTSGSTPKDL
FEDVAEELEKQYHEDKTRIKDAMKSGKITMFHSWTFEDFKAAISEEVGSSMISDIKLKLV
YEELLERAKEREEKEAKKRQRLADDFTKLLHTYKEITASSNWEDSKPLFEESLEYRFFPP
WFPAMFFVRSIAEESSRREIFEEYIAHLLEKAKEKERKREEEKAKKEKDREDKEKRKEKE
RKEKERERDREKGKDRTKMDETDGENLDISDSYGHKEEKKKDREKDRKQHRKRHQSTADD
GSSDKDDREESKKSHRHGSDRKKSRKHAHSTESDSESRHKKHKRDRDGSRRNSGYEELED
GELGEDGEIQ
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaattctcaaccatctagtgctcagccacattggcctcctgcagttggatcc
atggtacctcaaagttatggctctcccttatcttcacagtttcgaccagtggccccaaca
cagcaaggacagcactttgttccagctgcttcccaacagttccgacctgttgggcaggtt
ccttctccaaatgctgggatgccagctgttcaaaatttgcagatgcagttttctcagcca
atgcagcagtatcaaccccggccaaatcaacctggtctttctacacctttacaacagtct
gtacaagtaccatatggtcaaacaaacagaccttttacatctgaactgccacattcgcat
caatctgccccccctttgaatagtcatatgcctggtgtaggagcccctggaatgcccccg
tcttcatcatatggttttgcaccatcttcttttggcttgccacagaatgttggcacacct
tcccagtttcagcctatatctcaagtgcatgcatctgttgccccagtttccatgcaacct
tggttgtcaactggaaaccagagtgtttcacttgctacaccaatacaacagactagccaa
cagcctcccctttcttctgctgatgcggtcgcaaatgttcctaaccttactctgcaatct
tctgattggcaagagcatacatcagttgatggaagaagatactattacaacaagaagaca
agacaatctagttgggaaaagcctctggaactgatgacaccaatagagagagctgatgca
tccacagtttggaaggaattcacaactacagagggaagaaaatattattacaacaaggtt
acaaagcagtctaagtggacaatacctgaggaattgaagttagcacgtgagcaagctcag
gcagcagctagccaaggaaccccatcaggctcaggagtgcctcaagctccagttgctgct
gcaggctctgcatctgagatgccttctacagctatttctttgagctccaacactttgcag
gattcaagcctggtttcagttatgcctgttgttaattcttcatccacttcagtatctgga
ccaacagctgttcctgtttcacaatctgctactacagatgcaccaggggcagtgtctgtg
tcacctttacctgctgttccctctggaggttccactgtttctgttccttctgtcagtgct
aacacagcagtcacaagaagcttggaacctatagcaactcaagacacagatggagcttct
cttcaagacattgaggaagcgaaaaaggggatgacaactgctggaaaagttaatgtgact
cccgtagaagagaaacttctggatgatgagcctttagtatatgcaaataagctggaggca
aaaaatgctttcaaatcactccttgaatctgcaaatgtgcaatctgattggacttgggag
caggcaatgagggaaataattaatgacaaaaggtatggtgctttgaagacacttggtgag
cggaagcaagcctttaatgagtatttgggtcaaagaaaaaagttagaagctgaggaaagg
cgcatgagactgaagaaggctcgggaggagttcacaaaaatgctggaagattccacggaa
ctaacttcatccatgagatggagcaaagctcaaagtttgtttgaaaatgatgagcggttt
aaggctgttgaacgagccagagatcgggaagatctttttgaaagctatatagtggatctt
gagaggaaggaaagggaacatgctgcagaggaaaaaaggcgtaatatagcagaatataga
aaatttctggaatcctgtgattttattaaggcaaatagcctgtggaggaaagttcaagat
cgcttggaggatgatgaaagatgctcacgtcttgaaaaaattgaccggctgctaatattc
caggactacattcatgacttagagaaggaagacgaggaaaaaaagaagatgcaaaaggaa
caattgagacgtgccgagcgcaaaaaccgtgatgcatttcgtcagctaatggaagatcat
gttgctgatggcactcttacggctaaaacttattggcgagactatagtttgaaggtgaaa
gatttgcctcaatatcttgctgttgcatctaacacatctggttcaacaccaaaagatttg
ttcgaggatgttgctgaagaattagaaaaacagtatcacgaggacaaaacccgtataaag
gatgcaatgaagtcggggaagattaccatgtttcattcatggacatttgaagacttcaag
gctgctatttcagaagaagttggttcctcaatgatatcagatattaaattaaagctcgtg
tatgaagagttacttgagagagccaaggagagggaggagaaagaggctaaaaaacgtcaa
cgtctagctgatgacttcactaaactattgcatacatataaggagataacggcatcttct
aattgggaggattccaaaccactttttgaagaaagcttagaatatagattctttccccct
tggtttcctgccatgttttttgttagatcaattgcagaagagagcagtaggagagagatc
tttgaggaatacattgcacacttactggagaaagctaaagagaaggagcgaaaaagagag
gaggaaaaggctaaaaaggagaaagatagagaagataaagagaaaaggaaagagaaggag
agaaaggagaaggaaagagaacgtgatagggagaagggcaaggatcgaactaaaatggat
gagacagatggtgagaatttagatatatctgacagctatggccataaagaagagaagaaa
aaggacagggaaaaagacaggaaacaacaccgtaaacgacatcaaagcactgctgatgat
gggagttctgacaaggatgatagagaggagtccaagaagtctcatagacatggtagcgac
cgcaagaaatcaagaaagcatgctcattcaaccgaatccgacagtgaaagtcggcataaa
aagcacaagagagatcgtgatgggtcgcgtagaaacagtggttatgaggagctcgaagat
ggtgaacttggtgaggatggtgaaattcagtag
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integrated database retrieval system
