Hibiscus syriacus (Rose-of-Sharon): 120195540
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Entry
120195540 CDS
T09559
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120195540
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120195540
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
120195540
NCBI-ProteinID:
XP_039053468
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All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MFLSHVLQLDIMEKVANRRRLVVWVIMMINLSLFLSACSDGTPARKLLKHTDSSNTHVRL
QLSDSLVVIDNELVEVTIQNPTGHLIGLKYKEMQNVLESRNHNHNKGYWDIVWDEDAYDK
LETEHVDVITQTDDLVELSFTKKWNHGKTLPLNIQKRFIVRRGIPGVYMYGVFDREEDFP
GAQMYQIRIAFKLKEDKFRFVAVSDMIQRIMPRSEDRDEHRSKTLDFKEAVVLTNPSNPS
LKGEVDDKYQYSTENKDNKLHGWISDDDGVGFWIITPSNEFRTGGPHKQDLTSHVGPTAL
SMFVSTHYTGTEIDTFYKQGEAWKKVFGPVLIYLNSAPSNDDHRNILWNDAKRQLSDEIE
SWPYNFTGSEDFPHSEQRGQVNGQLLVQDRYMVRPLMQAKSAFVGLAAHGDAGSWQTEGK
GYQFWTQTDNIGHFSIKNVRPGNYSFYAWVPGFIGDYKLDLNIIIHPGNKIELGTLIYDP
PRNGPTLWEIGVPDRSAAEFFIPEPYPQFMNSITKDDTDKFRQYGLWDRYSDIYREGDLV
YTVGTSNYSRDWFFAHVPRKTGNNTNRPTTWQIKYNLQDVNENGTYTLQLALAAASFAEV
QVRFNDPNAVRPYFTTKRIGNDNAVARHGIHGLYRLYNINVPGYIFHKGDNTIYLTQTRS
LNSFVAVMYDYIRLEGPNSLVK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctcgcatgttttacagttggacataatggagaaggtggcgaacaggaggcgg
cttgttgtatgggtgataatgatgatcaacttatctcttttcctttctgcctgctctgat
ggaactccggccagaaaactcctaaagcataccgacagcagtaacactcatgtccggtta
caattaagtgatagcctagtggttattgacaatgagcttgttgaagtcactatccaaaat
ccaactggtcatctgataggacttaaatataaagagatgcaaaatgtgctcgaaagtaga
aaccacaaccacaataaagggtactgggacattgtgtgggatgaagatgcctatgacaaa
ctggaaaccgaacatgttgatgtcataacacaaactgatgatttagtagagctttccttc
accaaaaaatggaaccatggcaagacacttcctttaaacatacaaaaaaggttcatagtc
cgacgcggcattccgggggtctacatgtatggcgttttcgaccgcgaggaagattttccg
ggtgctcaaatgtaccaaataaggattgctttcaagctcaaggaagacaagtttcggttt
gtggccgtatcggatatgatacagaggatcatgcctcggagtgaggatcgggacgaacat
cgcagtaagactcttgacttcaaagaagctgttgtattgaccaatccatccaatccaagc
cttaaaggagaggttgatgacaagtaccaatactctactgagaacaaagataacaagctt
cacggttggatatctgatgacgatggtgtcggtttttggataatcaccccgagcaacgag
ttccgaactggtggcccgcacaaacaggacctcacttctcatgttggtccgactgcactt
tcgatgtttgtcagtacacattataccgggaccgaaatagacacattctataagcaagga
gaggcctggaaaaaggtttttggtccggttttaatctaccttaattccgctccttcaaac
gatgaccaccgcaacatcctctggaatgacgctaaaagacagttgagtgatgaaatcgaa
agttggccttacaatttcactggatcagaagattttcctcactctgaacaacgaggacaa
gttaatgggcaattgttggtgcaagatcggtatatggttaggccattaatgcaggcgaaa
tctgcctttgtggggttggctgcccatggagacgcaggttcatggcaaacagaaggaaag
ggctaccaattctggactcaaactgacaatattggtcatttcagtataaaaaatgtccga
ccagggaattacagtttctacgcctgggtccctggtttcattggagactacaaattagac
ctcaacatcatcatccatcctggaaataagatcgagttgggtacacttatatatgatcct
ccaagaaatggccctacattgtgggaaatcggagttccggacaggtcggccgccgagttc
ttcataccggaaccgtacccacagtttatgaactcaattacgaaagatgacactgacaaa
ttcagacaatacggattgtgggaccggtactcggatatttatcgtgaaggtgatctcgtc
tacactgtgggcactagcaattattcgagggattggttctttgctcatgttcctaggaaa
acagggaacaatacgaaccggcctacgacatggcaaatcaagtacaatctccaagatgta
aacgagaatggaacttacactctccaattggcattagcagcagcttcttttgctgaagta
caggttagattcaacgatccgaatgccgttcgaccttatttcactacgaaaagaatcggt
aacgataacgctgtagcaaggcatggaattcatggactgtacagattgtataatattaac
gtaccaggatatatatttcataaaggggacaacaccatatatctgactcagacaagaagc
ctcaactctttcgtagctgttatgtacgactacattcgattagaagggccaaacagttta
gtcaaatag
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