Hibiscus syriacus (Rose-of-Sharon): 120195798
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Entry
120195798 CDS
T09559
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120195798
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsyr01002
]
120195798
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120195798
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120195798
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120195798
Peptidases and inhibitors [BR:
hsyr01002
]
Metallo peptidases
Family M67
120195798
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120195798
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
120195798
BRISC complex
120195798
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
120195798
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120195798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
120195798
NCBI-ProteinID:
XP_039053651
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MKREKKILIKRMSLTCVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGNVTAFIW
GASPQSRSDRRKDRVETNPEQLAAASAQADRMTASTGRTTRVIGWYHSHPHITVLPSHVD
VRSQAMYQLLDSGFIGLIFSCFSEDTNKVGRIQVIAFQSSDGKQSHVSGPIALSPVNRNP
VIDLELSLSNGNPLVTSGSAQVDSHMQDCSDSRSIQGSSQGGGRSVDLGGFFADADANHL
GHDQVRGYHNTNNVQNAVVDIDPLDMSESIQEAMYRSNLDMSGAEYVRKEIPLHVLPTSS
LVNLDSPLRSFTDLQRVLYEEERAAYNQAILQNMRDGKVHPLSFIHHTSTYQASMCKLIE
YCLSPAISALQDRLKENEIRLSMLTDEAKTLETEASKGSGPSSPHTHGFRASTSVGQRDL
VNSAEPISVRTFAGTGSRSRK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagagaaaaaaatattgataaagagaatgtctttaacatgtgtgaaaatgtca
gaggatgtgtggttaacttgtctcacgcatgcattgtccactgaaactgaagagatcatg
ggtcttcttctcggtgatattgagtactcaaaagatggaaatgttactgcattcatatgg
ggagcatcaccacaatcacgttctgatcgtcgaaaggaccgagtcgagacaaatcctgaa
cagttggctgctgcgtcagctcaagctgatagaatgactgcatcgactggcagaacgaca
agggtgattgggtggtaccattcacatccccatattactgttcttccttctcatgttgat
gtgcggtctcaggctatgtatcaacttttagattctggatttattgggcttatattttct
tgttttagcgaagatacaaacaaggtgggaagaattcaagtcattgcttttcagtcatcg
gatgggaagcagagccatgtttcaggaccaattgctttatcgccagtgaatagaaaccca
gttattgatctcgagttatctttaagtaatggaaatccattggtgacatctggatctgca
caagtagacagtcacatgcaagactgtagtgattccaggtccattcaaggatctagtcag
ggtggtggacgatctgtagacttgggaggtttcttcgctgatgctgatgcgaaccatcta
gggcatgatcaagtcagaggttaccataataccaataatgtacagaatgctgttgttgat
attgatcccctggatatgtcggaaagcattcaagaagccatgtaccgctcgaatttggac
atgagcggtgcagagtatgtccggaaagaaattcctcttcatgttttgccaacatcttct
cttgttaaccttgactcgccgttaaggtcattcacggatttgcaacgtgtactatatgaa
gaggagcgggcagcatataaccaagccatcttgcaaaatatgagagatggcaaagtgcat
cccctttctttcatccatcacacatctacatatcaagcttccatgtgcaagttaatcgaa
tattgtttaagtcctgccatcagtgcacttcaggatcgattaaaggagaatgaaattcgg
ttatcaatgctgacagatgaagctaagacgttggagactgaagcctccaaggggagcgga
ccaagttctccgcatactcatggattccgggcaagcacttctgtcggccagagagacttg
gttaattcagctgaacccatcagcgtgaggacatttgccggtactgggagccgaagcaga
aagtga
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