Hibiscus syriacus (Rose-of-Sharon): 120196200
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Entry
120196200 CDS
T09559
Name
(RefSeq) protein argonaute 4-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120196200
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120196200
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120196200
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120196200
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120196200
microRNA pathway
RISC loading complex
120196200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
120196200
NCBI-ProteinID:
XP_039053989
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MDSSEQEGNGAAPESLPPPPPVPADVVPIKVEPDAAKKKVALQPMARRGTGSKGQKIIVL
TNHFKVNVGSTDGYFFHYSVSLYYEDGRPVDGKGVGRKVIDKVQETYSSELAGKNFAYDG
EKSLFTVGSLPNNKHEFTVVLEDVMSNRNNGNASPDGSGSPNERERKRVRRSYNSKTFKV
EISFAAKIPLQAIQSALRGQESENTQEALRVLDIILRQHASKQGCLLVRQSFFHDNQNNF
TDIGGGVLGCRGFHSSFRATHGGLSLNIDVSTTMIIQPGPVVDFLLANQNAKDPYSVDWT
KAKRVLKNLRIKVSPSNLEYKITGLSEQVCRDQMFSMKQKGMKNENGEAETVEITIYDYF
VNHRNIQLRYSGDLPCINVGKPKRPTYIPIELCSLVSLQRYTKALNTMQRASLVEKSRQK
PQERMNVLSNLLRTSNYGAEPMLRSCGVSISSNFTQVEGRLLQPPKLRVGNGEDFIPRNG
RWNFNNKKLVEPTRIERWAVANFSARCDPNNIVQSLIRCGEMKGIKIDPPFDVFIEMGQN
RRLPPVARVEKMFDLIQSKLPGAPQFLLCLLPDRKNSDLYGPWKQKNLSEFGIVTQCMAP
TKVNDQYLTNLLLKINAKLGGLNSILTIERSIPMVSKVPTIILGMDVSHGSPGQSDVPSI
AAVVSSRQWPLISRYRAAVRTQSPKLEMLDSLFKPSGKDDDGIMREALLDFYSSSGKRKP
DQIIIFRDGVSESQFNQVLNKELDQVIEACKFLDETWDPKFVVIVAQKNHHTKFFQQGSP
DNVQPGTVIDRSVCHPKNNDFYLCAHAGMIGTTRPTHYHVLLDQVGFSADDLQELVHSLS
YVYQRSTPPSLSLLLFATPTWRLHSWDNL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctgagcaagaaggaaatggggcggctcctgaatctcttccccctccacca
cctgtgcctgctgatgtggttccaattaaagtagaacctgatgctgcgaagaagaaggtt
gcactacaaccaatggccaggcgtggtactggatcaaaggggcaaaagataattgttctc
actaatcattttaaagtgaatgtgggcagtactgatggttatttcttccattacagtgtc
tctctttactatgaagatggtcgtccagtggacggtaagggtgttgggaggaaagtgatt
gacaaagtgcaggagacctacagcagtgagttggctgggaagaattttgcctatgatggg
gagaaaagtttgtttactgtaggatcccttccgaacaacaagcatgagtttactgttgta
cttgaggatgttatgtcgaacagaaacaatgggaatgctagccctgatggtagtggcagc
ccaaatgagcgcgaaaggaagcgagtaagacggtcttataattcaaagacgtttaaagtg
gagataagctttgctgccaaaattcccttgcaagcaattcaaagtgctctgcgaggacag
gagtctgagaacacacaagaagcactgagggtgcttgatatcatattaaggcagcatgct
tctaaacagggatgcctacttgttcgccagtctttcttccatgacaaccagaataatttt
acagacattggaggaggtgtccttggctgtaggggtttccattcgagcttccgagccacg
catggaggcctttcattgaatattgacgtgtcaactacgatgataattcaaccaggtcca
gtagttgactttttacttgctaatcagaatgcaaaagacccctactctgttgactggact
aaggccaaaagagtgcttaagaatctgaggattaaagttagtccatccaacctggagtac
aagatcactgggttgagtgagcaagtgtgcagagatcaaatgttctctatgaagcaaaaa
ggtatgaagaatgaaaatggtgaagcagagacagtagagattactatatatgattatttt
gtcaaccatcgaaacatacagttgcgttattctggtgatctcccatgcataaatgttggc
aagccaaagcgtcccacttatattcccattgagctttgctctttggtgtccttgcaacgc
tatacgaaagctctgaacactatgcaaagagcttccttggttgaaaaatctaggcagaag
ccacaagaaaggatgaatgtgttgtcgaatcttttacgaaccagtaactatggcgctgaa
ccaatgttgcgatcatgtggtgtttctataagttctaatttcacccaagttgaaggtcgt
cttctacaacccccaaagttaagagtgggcaatggtgaagatttcattccaaggaatggg
cgttggaattttaacaataagaaattggtggagccaactaggattgaaagatgggctgtt
gctaacttttctgctcgttgtgatccaaataacattgtgcaaagtctgattcggtgtgga
gaaatgaaaggaattaaaatagatcctccatttgatgtatttattgagatgggccaaaat
agacgcctcccaccggttgctagagttgagaaaatgtttgaccttatacaatctaaactg
cctggagctccacagtttcttctgtgtctgcttcctgataggaagaactctgatctctat
ggtccatggaagcagaaaaatctttctgagtttggtatagtgactcagtgtatggcacca
actaaagtgaacgatcagtaccttacaaatttgcttctgaagataaatgctaagcttgga
ggattaaattcaatattgaccattgagagatcaattcctatggtttcaaaggttccaact
atcatccttggtatggatgtgtcgcatggctcacctgggcagtcggatgtcccttcgatt
gctgcggtggttagctccagacagtggccattgatttcccgctatagggcagctgtgcgt
acacaatctccgaagcttgaaatgttagattctcttttcaaaccatctggcaaggatgat
gatggtatcatgagggaagctctgttggatttctactcaagttcagggaagaggaagcct
gatcagataatcatattcagggatggggtcagcgagtctcagttcaatcaggttttgaac
aaagaactggatcaagttatagaggcttgcaagttcctcgatgagacctgggacccaaag
tttgtggtgattgttgcacagaaaaaccatcataccaagtttttccagcagggatctccg
gacaatgtgcaacctggaactgtgattgaccgaagtgtatgccacccgaagaacaatgat
ttttatctctgtgctcatgctgggatgatcggaaccacaaggccaacgcattatcatgtt
ctcttggatcaggttggcttttcagctgatgatctgcaggaacttgtccattctttgtcg
tatgtgtatcaaaggagcacaccgccatctctgtcgttgctcctatttgctacgcccact
tggcggcttcacagttgggacaatttatga
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