Hibiscus syriacus (Rose-of-Sharon): 120196214
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Entry
120196214 CDS
T09559
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120196214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120196214
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120196214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120196214
NCBI-ProteinID:
XP_039053998
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MAAKPGSAPTTYSPNLGQKTRPPIFKDNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSA
YAELGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFGTPVRGQGSDHKEFSSMLHK
ALEGAIMLESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVACL
GKNLVIDPILEEESYQDGSLMLTCMPSRYEVTQLTFTGEWPTPDINEAMQLCLDACNKLG
KVMRTCLKEAASASQE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagcccggttcagctccgacaacgtattcgccaaatcttggccagaaaacc
cgcccacctattttcaaagacaatgatctcgattgggtccgacctgatggccgcggcttc
caccagtgccgaccagcatttttcaggacaggtgcagtgaactctgcttctggatctgct
tatgcagagcttgggaataccaaggtcattgtatctgtttttgggccaagggaaagtaag
aaagcaatgatgtacagtgatactgggaggttaaattgtaatgtcagttacacaacattt
ggcactccagttcgaggacagggatcggatcacaaagagttttcgtcaatgcttcataaa
gctttggaaggtgcaataatgttggaatcattccccaagaccaccgtggatgtttttgca
ttggtgttggaatctgggggcagtgatcttcctgtggtgatatcatgtgcgagtcttgcc
cttgcagatgcagggatcatgatgtatgaccttgttgctgcagtttctgtggcctgtcta
gggaaaaacctcgtgattgatcctattcttgaagaggaaagctaccaagatggaagctta
atgcttacatgtatgccgtctcgttatgaggtcactcaactaacatttacgggagaatgg
ccaactccagatattaatgaagcaatgcagctttgccttgatgcttgcaataagcttggt
aaagtgatgaggacgtgcttgaaagaagccgcatctgcttcacaagagtag
DBGET
integrated database retrieval system
