KEGG   Hibiscus syriacus (Rose-of-Sharon): 120196271
Entry
120196271         CDS       T09559                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120196271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120196271
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120196271
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     120196271
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 120196271
NCBI-ProteinID: XP_039054042
LinkDB
Position
Unknown
AA seq 156 aa
MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGILRSFDQFGNVFLSPNLLDLTCLPV
LSVPDNFKYVSANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPPH
MTRVSVAEIRRAQKAESEATDLKGTMRKRMEFLDLD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggccctgaagatatctacctctctacttctcttgccagttatcttgac
aggaaacttttagtgctcctgcgagatggtcggaagcttatgggaatattgcgctcattt
gaccaatttggtaatgttttcttgtcacctaaccttctggacctgacatgcctaccagtt
ttatctgttcctgacaattttaaatatgtttcagccaatgctgttcttgagggtgcttgt
gaaagagttatagttggtgatctttactgtgatatccctttaggtctatatgtaatccgt
ggggagaatgttgtcttgattggtgaactggatttggagagagaggaacttcctccgcat
atgactcgtgtttctgttgcagaaataagaagggcacagaaagcagaaagcgaggcaaca
gatctcaaaggtacaatgaggaaaagaatggagtttcttgatttggactaa

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