Hibiscus syriacus (Rose-of-Sharon): 120196271
Help
Entry
120196271 CDS
T09559
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120196271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120196271
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120196271
mRNA degradation factors
5'-3' decay
Lsm complex
120196271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
120196271
NCBI-ProteinID:
XP_039054042
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGILRSFDQFGNVFLSPNLLDLTCLPV
LSVPDNFKYVSANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPPH
MTRVSVAEIRRAQKAESEATDLKGTMRKRMEFLDLD
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggccctgaagatatctacctctctacttctcttgccagttatcttgac
aggaaacttttagtgctcctgcgagatggtcggaagcttatgggaatattgcgctcattt
gaccaatttggtaatgttttcttgtcacctaaccttctggacctgacatgcctaccagtt
ttatctgttcctgacaattttaaatatgtttcagccaatgctgttcttgagggtgcttgt
gaaagagttatagttggtgatctttactgtgatatccctttaggtctatatgtaatccgt
ggggagaatgttgtcttgattggtgaactggatttggagagagaggaacttcctccgcat
atgactcgtgtttctgttgcagaaataagaagggcacagaaagcagaaagcgaggcaaca
gatctcaaaggtacaatgaggaaaagaatggagtttcttgatttggactaa
DBGET
integrated database retrieval system