Hibiscus syriacus (Rose-of-Sharon): 120196431
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Entry
120196431 CDS
T09559
Name
(RefSeq) DNA ligase 6-like isoform X1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
120196431
NCBI-ProteinID:
XP_039054170
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MSSHSAASASAFTAKTITIDSTQLYLAATNSSDSTLYFPPIPSSFYPSKLIPNTRFIIDS
FRHNTTTTFSAAYFLSHFHSDHYSGLSPSWSKGIIFCSHLTSLLLIQILKILPHFIFPLP
LNDPVAIDGCEVVLIDANHCPGAVQFLFKVPTKNGSFERYVHTGDCRYCSSMKLNSYLKE
FFGCDAIFLDTTYCNPKFVFPSQEECVDYVVSVVDMIGKEFKGKRVLFLVATYVVGKEKI
LVEVARRCKKKIFVDGRKMEILNVLGYGEDEVFTVDESESDVHVVGWNVLGETWPYFRPN
FVKMKDIMVEKGYEKVVGFVPTGWTYEIKRNKFAVRSNDSVEIHLVPYSEHSNYDELREY
VKFLKPKKVIPTVGMDIEKLDSENADKLRKHFAGLVDEMANKKDFLMGFHCGNYESVENI
EIDASPVLNEEKDMERKQNILEMRNFRSNDVDVILNDSSSVHKPDLQDSAIQGEEERERI
VEELGDSLPKWVTRDQILNLISISRWNIVEAVSNFYEHENELYEQFSAFRTSDSASQASS
SNNSVSLLNSGPFRSSTDESLSLHLSQVIKPSSSKLSVRSNISPVKRKKNTENRSNKKVK
SNPKLKSSESKQPTITSFFGKVSVDASKGGRTGPQIEECPKGESTLSTDLTKSYLEKIDQ
FIQIINANESSRDYVVTLLEKAQGDINKALDIYYSNPDVKLDENTENIIVSNKSAQVPCC
TNDCPVTPVSKNKHAPEESRCITYLSLQGQPVENVDTTLVSLPPDKYKPIEHACWRSGQL
APYVHLARTFDLVGSQNGKIKATSMLCNMFRSLLALSPEDVLPAVYLCTHKIAADHENIE
LNIGGSLVTSALEEACGTNRSKIRDMYNDMGDLGDVAQACRKTQTLLATPPSLLIRDVYS
VLRKISVQTGSGSTIRKKNLIVSLIRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQA
VVMNSSLNLYHEGTADSLKEKLQGISAAVTEAYNVLPNLDLLVPSLMKEGIAFSSSTLSM
VPGIPIKPMLAKITNGVPEVLKFFQNKAFTCEYKYDGQRVQIHKLADGSMRVFSRNGDET
TLRFPDLVNTIKESAKPAVQTFVLDAEVVAIDRKNGQKLMSFQELSSRERGSKDSLITVD
KIKVNICVFVFDIMFANGEQLLDVPLRQRRKRLKDLFHDEKLGHFEYAKEITVEADDTCL
TSEATFNRINSFLEDALQFSCEGIMVKSLDTDAGYLPSKRSDSWLKVKRDYVEGLSDSLD
LVPIGAWHGNGRKAGWYSPFLMACYNPDTEDFQSVCRVMSGFSDSFYKEMKEFFSGDRIL
AKKPAYYQTAEVPDMWFTPELVWEIRGADFTVSPVHQAAIGLVHPSRGISMRFPRFIRSV
TDRNPEECSTATDIAEMFHSQTRKMDVTV
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcactcggcggcctccgcctccgccttcaccgccaaaaccattaccatagac
tccacccaactctacctcgctgcgacaaactcctccgattccaccctttatttcccccca
atcccctcctctttctatccctctaaactcatccctaacacccgcttcattatcgactcc
ttccgccacaacaccaccaccactttctccgccgcctacttcctctcccacttccactct
gaccactactctggtctatccccttcctggtccaaaggcatcatcttttgttcccacctc
acttccctcctcctcatccaaatccttaaaatacttccccatttcatcttcccgttacct
ctaaacgaccccgttgcgatagacggctgtgaggtcgttctcattgacgctaatcattgc
cctggtgctgtccagttcttattcaaagttcccacaaaaaatgggagctttgaaaggtat
gtgcacaccggcgattgtcgttattgtagctcaatgaaattgaatagttatttgaaggaa
ttttttggttgcgatgctatttttttagatacaacttattgtaatccaaaattcgtgttt
ccttctcaagaagaatgtgttgattacgtggttagtgtggtagatatgatagggaaggag
tttaagggaaaaagggttttgtttcttgttgccacttatgttgttggaaaagagaagata
ttggttgaggttgctcggcgatgtaagaagaagatatttgttgatgggaggaaaatggag
attttgaatgttttggggtatggggaagatgaagtttttaccgtagatgagagtgagagt
gatgttcatgtcgttggttggaatgtattaggcgagacttggccgtattttcggccgaat
tttgtgaaaatgaaagatattatggtggaaaaagggtatgagaaggttgttggttttgtg
ccaactgggtggacttatgaaatcaaacggaataaatttgctgtgagatcaaatgattca
gtcgagatacatctagtcccttacagtgagcattctaattatgatgagcttagagaatat
gttaagtttttgaaacccaagaaggttattcctactgttggtatggacattgagaagctt
gacagtgagaatgctgataaattgagaaaacactttgctggcctggttgatgaaatggct
aataaaaaggatttcctgatgggttttcattgtggcaattatgaaagtgtagaaaacatt
gaaattgatgctagtccagtcttgaatgaggaaaaggacatggagagaaagcaaaatatt
ttggaaatgagaaattttaggagtaatgatgtagatgttattttgaatgattcatcttct
gtgcacaaacctgatttacaagattcagcaatacagggtgaggaggaaagagagagaata
gttgaggaattaggagactctctgcccaaatgggttaccagggatcagatattaaatttg
attagcatctccagatggaatattgttgaagcagtttctaatttttatgaacatgaaaat
gagttatatgaacaattctctgcttttagaacttctgattctgcttctcaggccagttca
tctaacaactctgtctcacttctaaattcagggccttttagaagtagcactgatgaaagt
ttaagccttcatttaagtcaagtcatcaagccttctagttctaaactttcagttcggagc
aacatatctcctgtcaaaagaaagaaaaacaccgaaaacaggtcaaataagaaagtcaaa
agtaacccaaaattgaaatctagcgagtcaaagcaacctacgataactagcttctttggt
aaagtttcggttgatgcctctaaaggtggtaggactggtccgcaaattgaggaatgcccc
aaaggtgaaagtactttgtctactgacttgactaaatcatatttagagaaaatcgaccag
tttattcagataataaatgccaatgaatcgtcaagagattatgtggtcaccttacttgag
aaggcccaaggagatatcaacaaggcactggatatatattacagtaatcccgatgtgaag
ctcgatgagaatacagaaaatattatagtttccaataaatcagctcaggtcccctgctgt
actaatgattgtcctgtaactcctgttagcaagaacaaacatgcaccagaggaatcaaga
tgtattacctatttatctttgcagggacaaccagtggaaaatgttgacacaactcttgta
tcattgcctcctgataaatataaacctatagagcatgcatgctggagatctggtcagctt
gctccatatgtccatcttgcacggactttcgaccttgttggcagtcaaaatggaaagatt
aaagctacttctatgctttgcaatatgtttaggagtttgctggccttgtcccccgaggat
gtgcttcctgctgtgtatctgtgcacccataaaattgctgctgaccatgaaaatattgaa
ttgaatattggcggaagcttggttacatccgcactggaagaagcttgcgggactaaccgt
tcgaaaataagggatatgtacaatgacatgggtgatcttggtgatgttgcacaagcatgc
cggaaaacccaaactctgcttgctactccaccatcactactaattagggacgtatattct
gtgcttaggaagataagtgtacaaacgggcagtggcagtaccatccggaagaaaaacctc
attgtgagtcttatacgttcatgtagagagaaagagatgaagtttctggttagaactttg
gtcaggaatttgcgaataggagcaatgatgaagacggttcttcctgcattggctcaagca
gttgtcatgaattcctctcttaatctttatcatgaagggacagctgatagtctaaaagag
aagcttcagggtatttcggcagcagtaactgaagcatataatgtacttccaaatttggat
ttacttgttccttcactaatgaaggaaggtattgcgttttcatcatcaaccttgtcgatg
gttccgggaatacctattaagcccatgcttgcaaaaattaccaatggggttccagaagta
ctgaagttttttcaaaacaaagcttttacatgtgaatataaatatgatggtcagcgtgtc
caaattcacaaattggctgatggatcaatgcgtgtcttttcacgaaatggagatgaaaca
acattaagatttccggatttagttaatacaattaaggagtctgctaagcctgctgtccaa
actttcgtattagatgcggaggttgttgcaattgataggaagaatggtcagaagctgatg
tccttccaagaattatcttcaagagaaagagggagcaaagattctttgatcacagtggat
aaaataaaggttaacatttgcgtattcgtgtttgatatcatgtttgccaatggagagcaa
ctcttagatgttcctctgcgccaaagaaggaaacgtttgaaggatttgtttcacgatgag
aagttgggacattttgaatatgcaaaagaaatcactgtggaagcagatgatacttgtttg
accagtgaagccacatttaatcggataaactccttccttgaagatgcattgcagttttca
tgcgaaggaattatggttaaatccttggatactgatgctggatatcttccgtcaaagcga
agtgattcatggttaaaggtaaagcgggactatgtggaagggttaagcgactcccttgat
ttagtcccgattggtgcttggcatggtaatggaagaaaagcaggatggtatagtccgttc
ctcatggcatgttacaacccagacactgaagattttcaaagcgtatgccgtgttatgtct
ggattctccgattcattttacaaagagatgaaagagttcttttccggagataggatctta
gccaaaaagcctgcttactatcaaacagctgaggtgcctgatatgtggttcactccagaa
cttgtttgggaaataagaggtgcagacttcactgtatcaccagttcatcaggctgcgata
gggttagtccatccctcccgtggcatctcaatgagatttccgaggttcatccgctcggtg
acagacagaaatcctgaggaatgtagcacggcaacagacatagctgaaatgtttcattcg
cagactcgaaagatggatgtgacagtgtaa
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