Hibiscus syriacus (Rose-of-Sharon): 120196476
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Entry
120196476 CDS
T09559
Name
(RefSeq) plant-specific TFIIB-related protein 1-like
KO
K03124
transcription initiation factor TFIIB
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120196476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120196476
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
120196476
Prokaryotic type
Archaeal type
TFB
120196476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
zf-UBP
ORC6_2nd
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
120196476
NCBI-ProteinID:
XP_039054212
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MKCPYCSAAQGRCATTTTGRSITECTSCGRVVEERQSQNHHLFHMRAQDTPLCLVTSDIP
IPAPASAYRIHEDDPFEPTGFITAFSTWSLEPSPLFLRSSLSFSGHLAELERILELSSSS
APPETSSPTVVVDNLRAYMQIIDVASILGLDCVISDHAFQLFRDCCSATCLRNRSVEALA
TAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRF
CTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAKICKVT
GLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTIATGRTSVPRVDPVDLSSTL
DRDKQQDSKPNKPNDVSEPGLQARGEDGAENNGNSSGTHAAMLNRPPQFRQPWLQFGAPS
VRTVGDKNQTTIGGDINEAQQSCAELEKKVDAPKTDTKGASSSLRPSQFSSSPGSNVSTI
TWPLGSPPTSSPSPNMPIVHPPKLPPGYAEVKGPGTQNGSKVNNLRGDSE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccgtattgctcggcggcgcaaggtcggtgcgccactacgacaaccggccgg
tccataacagagtgcacctcgtgcggacgtgtcgtcgaagagcgccaatcccaaaaccat
cacctctttcacatgcgagctcaagatacccctctctgcctcgtgacctccgacatcccc
atccccgctcccgcttccgcctaccgaatccacgaagacgacccgtttgagcctacgggc
tttatcactgctttttccacatggtccctggagcccagtccactcttcctccggtcttct
ctatccttttccggccacctagcggagctcgagcggattcttgaactttcttcgtcttca
gcgcctccggaaacgtcgtctccgacggttgtggtggataatttgagggcttatatgcag
attattgacgtggcgtctattttagggttggattgcgttatatcggatcacgcgttccag
ttatttagggattgttgttcggctacctgtttgaggaaccgaagtgttgaggcgcttgct
actgctgctcttgttcaggccattagggaagctcaagagccccgaaccctacaggaaatc
tcaattgctgccaatgtgccacagaaagagattggtaagtacatcaaaatcctgggagaa
gctctacaattaagtcaacctatcaacagtaattcaatatcagttcatatgccgagattt
tgcactctcctccagctcaacaaatctgcacaggagctggcaactcatatcggggaagtt
gtgatcaataaatgcttttgcactcgccgaaatccgattagtatctctgcagctgctata
tatctggcatgccaattagaagacaaacgcaagacacaggctaagatatgtaaggtgaca
ggtcttacagaggtcaccctccggaaagtctacaaggagctattagagaactgggatgat
ctacttccatctaattacactccagctgtccctccagagaaagcatttcccacaactaca
attgccacgggcagaacttcagtgcctagagttgatccagttgatctgagttctacattg
gatagagataagcagcaagactcaaagccgaataagcctaatgatgtgtcagaacctggc
cttcaagctagaggcgaagatggtgcagaaaacaacggcaattcttctggaacccatgct
gctatgttgaaccggccaccacagttcaggcagccttggcttcagtttggggccccaagt
gttaggacagtaggagataaaaaccagactaccattggaggagacattaatgaggcgcaa
caaagctgtgcagagttagaaaagaaagtagatgcgccaaagaccgatacaaagggtgct
agcagttctctaaggccaagtcagttctcaagctctccgggttcaaatgtgagtacaatc
acttggccattaggttcaccacccacatcaagtccttcaccaaacatgcctattgtgcat
ccaccgaagttgccaccgggttatgcagaagttaaaggaccggggactcaaaatggaagt
aaggttaacaatctgcgtggagactcagagtga
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