Hibiscus syriacus (Rose-of-Sharon): 120197246
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Entry
120197246 CDS
T09559
Name
(RefSeq) pre-mRNA-processing protein 40C-like
KO
K12824
transcription elongation regulator 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120197246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120197246
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120197246
Complex B
120197246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
120197246
NCBI-ProteinID:
XP_039054774
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MQPPVPVPQGAMSSSASFSFSPNPQLVQNAQNQPSKSDTPATGTQTATVSSMSTVSQPGQ
LPVHNSSDFTMNASTTPSFAPITSWMPATPSFPMSSGSSGTPGAPAHPGLVPSIQMITAS
AAAADSPSPAVPGHSAPISLNPAVQQQAYPPYTSMPPMVSSTHGFWMQHPPMGGFPRPPF
VPYPSIYPGPFPSTSHGMLHPAPSSDSQPPGVRLLGMSPFAPSIAALANQPLAIQTGLPQ
GIDNRKLVHDVGTKAETAFSEQSDVWTAHKTDTGVVYYYNALTGESTYEKPAGFRGEPDQ
VTVQPTPISVEQLAGTGWALVTTNDGKKYYYNSKTKISSWQIPSEVTELRKKQDGEVLKE
HAAPVSTTDIVAEKGSTPVSLSAPAVNTGGRDAMPLRMSVVPSSSSALDLIKKKLQDSGV
PSSSTVPVTPVTAANDLNGSKAVDVKGLQSGNNKDKLKDNNGDGNISESSSDSEDADTGP
SKEECIMQFKEMLKELGVAPFSKWERELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEE
ERREKRAAQKAAIEGFKKLLGEASEDIDHNTNYQSFKRKWGSDPRFEALDRKDRELLLNE
RVFLLKRAAEDKTRAIRAAAASSFKAMIKEKGDINVNSRWSRVKESLRNDPRYKSVKHED
REVLFNDYISELKAVDERAERKEKVRKEEEDKLKERERELRKRKEREEQEMKRVRLKVRR
KEAVSSFQALLVETIKHPQASWTESKPKLEKDPQGRAANPDLDSSDMEKLFREHIKMLFE
RFSNDFRALLSEVITQDAAAQHTEGGKTVLNSWSTAKRLLKPDPRYNKMPRKEREVLWRR
HAEDMLRKQKSATDQEEEKHTDAKGRSSAGDFRRYSSGARNVHERR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctcctgtaccagtgccgcagggagccatgtcgagttctgcaagcttttccttt
tctccaaatcctcagttggttcagaatgcacaaaatcaaccctctaaatctgatacacca
gccactggtacacaaactgctactgtatcatctatgtcaactgtttctcagcctggccaa
ttaccggtccataactcttcagattttacaatgaatgcatctaccactcccagttttgct
cctataacttcatggatgcccgccactccatctttccccatgtctagtggatcttcagga
actccaggagcaccagcacaccctggattagtaccatctatccagatgattactgcctcg
gctgctgctgctgattctccctctcctgcagttcctggacacagtgctcccatttcatta
aatccagctgtccaacaacaagcataccctccctatacatccatgcctcctatggtttct
tccacacatggattttggatgcagcatcctccaatgggtggctttcctaggcctccgttt
gtgccttaccctagtatttatcctggaccctttccttcaacatctcatggtatgcttcat
ccggcaccatcatctgattctcaacctcctggtgttagacttctgggaatgagtccattt
gcaccatctattgctgctcttgctaaccaaccattggcaatacagacaggattacctcaa
ggaattgataataggaaacttgtccatgatgttggaaccaaagctgaaactgctttcagt
gaacaatctgatgtctggaccgcccacaagactgacactggagttgtttattactataat
gcattaactggagagtcgacttatgaaaaacctgctggatttagaggggagcctgatcaa
gttactgtgcagccaactccaatttccgtggagcaattggcaggaacaggttgggcacta
gttaccacaaatgatggcaaaaaatattactacaacagcaaaaccaagattagtagctgg
cagatcccttctgaagttacagagttgagaaagaaacaagatggtgaagttttgaaggag
catgcagcaccagtatcaactactgatatagtggcagaaaaaggatctacgccagtaagt
ttgagtgctcctgctgttaacacaggtggccgtgatgccatgcctttaagaatgtcagtg
gtgcctagttcctcatctgcattggatttaattaagaagaagttgcaagattctggagtt
ccttcttcctcaactgttcctgttacgccagtaacagcagcaaatgatttaaatggctca
aaagcagttgatgttaagggtttgcagagtgggaacaacaaagataagctaaaagataac
aatggggatggtaacatatctgagtcctcttcagattctgaggatgcagacactgggcct
tctaaggaagagtgtattatgcaatttaaggaaatgctcaaagaattgggggttgcacca
ttctcaaaatgggaaagggaactcccaaagatagtgtttgatccacgttttaaggctatt
ccaagtcattctgctaggagatccttatttgaacactatgttaagacacgagctgaggag
gaacgcagagaaaaacgagcagctcagaaggctgcaatagaaggatttaagaagttgctg
ggtgaagcatcagaggatattgatcacaacaccaattatcagtctttcaaaagaaaatgg
ggaagtgatcctcgatttgaggctttggaccgtaaggatagggaacttttattaaatgaa
agggtttttcttttgaagagagcagctgaagacaagactcgagccattcgtgctgctgct
gcttctagttttaaggccatgattaaagagaaaggagatatcaatgttaattcccgttgg
tccagggtgaaggaaagcttgaggaatgatccaaggtataaatctgttaagcatgaggat
cgagaggttttgtttaatgattacatatctgaactcaaagccgtagacgagagagcagag
cgtaaggagaaagtgagaaaagaggaggaggataaactgaaggaaagagagagagagttg
cgaaaaaggaaagagagagaagaacaagaaatgaaaagggtgcggctcaaagttcgcagg
aaggaggcagtttcatcttttcaagctttgctcgtggaaacaattaaacatccccaggca
tcttggactgaatcgaagcctaagttggaaaaggatcctcagggacgtgcggcgaaccct
gatttagattcatctgatatggagaaactcttccgcgaacacataaaaatgctgtttgag
agattctcgaatgacttcagagctctattatccgaagtcataactcaagatgcagctgct
caacataccgaaggcggtaaaacagtcctcaattcatggtcgacggccaaacgtcttctg
aagccagatcccaggtataacaaaatgccaagaaaagagagggaagtactatggcgccga
catgccgaggatatgttgcggaagcaaaaatcagcgactgatcaagaggaagagaagcac
acagatgctaaaggcagaagctctgctggtgattttagaagatactcatcaggtgccagg
aatgtccatgaacgtagatag
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integrated database retrieval system
