Hibiscus syriacus (Rose-of-Sharon): 120197661
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Entry
120197661 CDS
T09559
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120197661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120197661
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120197661
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120197661
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120197661
PBAF complex
120197661
GBAF(ncBAF) complex
120197661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120197661
NCBI-ProteinID:
XP_039055031
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MEEKRRDAGNSPAGPSSAEPESASTRRRGGALKRKANSLSGSSSSSTPSKRVTREKSSLI
SYPPVNHYGPLTRARQGAPSGNVVLGLSLGSDGAKLGEARAVKQSVKAEDLEELNKASEE
WEALEAKIEADFEAIISRDINAHAVPNHCGWFSWTKIHHLEESILPSFFNGKSPDRTPDL
YMEIRNWIIKKFHANPSVQIELKNLEDLDIGDLDARQEVLEFLDYWGLINFHLFPPAGSA
VPKANGDGMSNKDSLLEKLFHFEEIESHPHVVTRSNLSTSSLLSGFLPESALAEDLMTPE
GPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNREFDSGMSSSDFILMEPGEASGL
SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFNSDDNRD
TNSKETAGPSADIDETSFSKDVLETTEGKTAPQEDQAQTTPMETSKPEDGKEVRASEETS
KPENLTDVSGGQETSKPEETDVAKDRKDTTENCALVALREAFEAIGYNLTSESILSFADV
GNPVMALAGFFARLVGPNIAVASAQSSLKSLSGSCPSIQLAARNCFVLEDPPNDPKEPTC
SESVVNDTGNRDAHNVKNSEDKSLEGEQKSSLSNHWDQNTEVSLPEEKVTSPSPNDLTMD
KKESSNIATNEEDKKANLNESSIINQSKDHQPSVMKVSNNLTTKEPSQPPKAVKEVDMSD
SVPVKKNECCDAAASKSAGESKPANASENLETASSSLSEAKNEQKLFKPSPGRKSTEPDE
ASNDVEMASVPQPSEKSEPHQPVALNSGNENGVAKDKNKEGKNQNGDSTDREDNSSIDKV
KNVAVTALSAAAVKAKLLADQEEDQIRQLAASLIEKQLFKMEAKLAFFNDMEGVVMKVKE
QLDRSRQRLFHERSQIIAARLGLPASSSRAMPPPNATSRVAANFSNSVARPPMSMKAPRP
PMSRPMTPTPSNQYVSPAVTGGSVRPSS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacggcgggacgcgggtaactcaccggcggggccgagctcagcggagccg
gagtcggcatcaactcgccgtcgaggtggagcgctgaagagaaaagccaattcgctttcc
gggtcgagctcttcatcaacgccgtcgaaacgggttactcgagagaagtcaagcttgatc
tcctaccctccggtcaaccattacggtcctttaaccagggctcgccaaggggcgcctagt
ggaaacgttgtcttgggtttgagcttgggatcggatggcgcgaagcttggggaggcaaga
gcggtgaaacaaagtgtgaaggcggaagatttggaggaattgaataaggcaagtgaagag
tgggaggctttggaagctaagattgaggctgattttgaggctattatatctcgtgacatt
aatgcgcatgctgttcctaatcattgcggatggttttcatggacaaaaattcaccatcta
gaggagagtatcttgccttctttctttaatgggaaatccccagatcgaacccctgattta
tacatggagattcgtaattggattataaagaaatttcatgcaaatccaagtgtgcagatt
gagttgaaaaatctggaagatcttgacattggtgacttggatgcaaggcaggaagtattg
gagttcctggactactggggtttgattaactttcatctattccctccagctggttcggct
gtacccaaagccaatggggatgggatgtccaataaggattctttgcttgaaaaattgttc
cactttgaggaaattgaatcacacccacacgttgttacaaggtctaacctttcaacttcc
tctttactgtctgggtttcttccagaatctgcgcttgctgaggacttgatgacacctgag
gggccatcggttgagtaccattgcaactcttgttcagctgattgctctcggaagcgctat
cattgccagaagcaggctgattttgacttatgtactgattgctttaacaaccgggagttt
gactctggcatgtcttcttcggatttcattctcatggaacctggtgaggcctctggtctt
agtggtggcaagtggacagatcaggaaaccctcctccttcttgaggcacttgaactttat
aaagaaaactggaatgagattgcggagcatgttgctacgaaaactaaagcacaatgcata
ctgcactttgttcaaatgccaattgaggatgtattctttaatagcgatgataacagagac
accaattcaaaagaaactgctggaccatctgccgatattgatgaaacatctttctctaaa
gatgtcttggaaacaacagagggtaagactgctcctcaagaggatcaggcccagactaca
ccaatggaaacttcaaaacctgaagatggaaaagaagtgagagctagcgaggaaacatct
aaacctgaaaatttaactgatgtaagtggtggtcaagaaacatcaaagccagaggaaacg
gatgtggcaaaagacagaaaagacacaactgaaaattgtgcacttgtggcactaagggag
gcatttgaagctattggttataatttaacatctgaaagcatactctcatttgctgatgta
ggaaatcctgtcatggcattggcagggttctttgcgcgtctggtcggacccaacattgct
gttgcttcagcccagagttcactgaaatcattatctggtagttgtcctagcattcaactg
gctgcaaggaactgctttgttttggaagatccaccaaatgacccgaaggaaccaacatgt
tctgagagtgttgtcaatgatacgggtaatcgggatgctcataatgtgaaaaactcggaa
gacaaaagccttgagggggagcagaaaagttcattgagcaaccattgggaccaaaacact
gaagtttctcttcctgaagagaaggtgacatcgccttcacccaatgacttaaccatggat
aaaaaagagtccagcaatattgcaactaatgaggaagataaaaaggctaatttgaatgaa
tccagcattattaatcaatcaaaggatcatcaaccaagtgtaatgaaggtatcaaataac
ttaacaacgaaagagccttctcagcctccaaaagcagtgaaggaagtagatatgtctgat
tcggttccagtgaaaaagaacgagtgttgtgatgcagctgcatcgaagtctgcgggagag
tctaaaccagcaaatgcatcagaaaatctagagactgcttcctcttctttatccgaagcg
aagaatgagcaaaaactttttaaaccaagtcctggtagaaaatctactgagcctgatgag
gcatcaaatgatgttgaaatggcatctgttccacaaccttcagaaaagagtgagcctcac
caaccagtcgcattaaattctggaaatgaaaatggagtagccaaagacaagaataaagaa
ggtaaaaaccagaatggtgactctacggacagagaagataatagtagcatcgataaagta
aagaatgttgcagttacggcactctcagcagcagcagtgaaggcgaaacttctagcagat
caggaagaggaccaaatccgacaacttgctgcttcattaatagaaaaacagttatttaag
atggaagccaaattagcattcttcaatgatatggaaggagttgtgatgaaggtgaaggag
caattggacaggtcgaggcagaggcttttccatgagcggtcacagataattgccgctcga
ctgggcttgccagcttcctcctctagagcaatgccaccaccaaatgctacaagtagagtt
gctgcaaacttttcaaattcagttgcaaggcctcctatgagcatgaaagccccaagaccg
ccaatgtcgagacccatgactcctacgccttccaaccaatatgtatctccagcagttaca
ggtggttcagttcgaccttctagctag
DBGET
integrated database retrieval system
