KEGG   Hibiscus syriacus (Rose-of-Sharon): 120197974
Entry
120197974         CDS       T09559                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013  Nucleocytoplasmic transport
hsyr03015  mRNA surveillance pathway
hsyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120197974
  09122 Translation
   03013 Nucleocytoplasmic transport
    120197974
   03015 mRNA surveillance pathway
    120197974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120197974
   03041 Spliceosome [BR:hsyr03041]
    120197974
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     120197974
    TREX complex
     120197974
Spliceosome [BR:hsyr03041]
 Complex C
  Other components
   EJC/TREX
    120197974
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    120197974
SSDB
Motif
Pfam: RRM_1 FoP_duplication DUF632 RRM_3
Other DBs
NCBI-GeneID: 120197974
NCBI-ProteinID: XP_039055307
LinkDB
Position
Unknown
AA seq 271 aa
MQIEYDRKCCKLKGLDEKGAKANTVVSTCNIIITKLRTAIQVVDNISVTIPPSYRRGPIG
LNTRPSQHSIAKSSHKTRSLPWKHDLFEDSLRAAGISGVEVGTKLYVSNLDPEVTNEDIK
ELFSEIGELKRHSVHYDKNGRSSGSAEVVYLRRSDAFAALKRYNNVMLDGKPMIIEIVGA
NADVPISARVKVTGTKGRKKRTVVMMPEAGQLRRSAGISRGPDRRGGMTMRSGRGGGGRG
RGRGKRKPVEKSADDLDKELENYHAESMNVS
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcagatagaatatgaccgaaaatgctgtaagttgaaaggactggatgaaaagggtgct
aaagctaatacagttgtttcaacctgcaatataatcattacaaaattaagaactgcaatt
caagttgttgacaatatatccgtgactatacctccctcttatcgtcggggccccatcggt
cttaatacccgcccatcccagcattccattgcaaagtcttcccacaaaaccaggagcttg
ccatggaagcatgatttgtttgaagacagccttagagctgcagggatatctggagtagaa
gttggcaccaagttatatgtttccaacttggaccctgaagtcacaaatgaagatatcaag
gaacttttctctgagattggagagctgaaaagacactcggtacattatgataaaaacggt
cggtcaagtggctcagctgaagttgtttatcttagaaggagtgatgcatttgctgctctt
aagcggtacaacaatgtaatgttggatggaaaacccatgataattgaaattgttggtgcc
aatgcagacgtccctatttctgctcgtgttaaggtaactggaacaaagggaaggaagaag
aggactgttgttatgatgccagaagcaggtcaattgagaagatctgctggaattagtcgt
ggtcctgaccgtcgtgggggtatgactatgaggagtggccgtggtggaggtggtcgtggt
aggggccgtggaaaaaggaagcctgtagagaagtcagcagatgaccttgacaaggagctt
gagaactatcatgctgaatccatgaatgtttcctga

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